Pseudopropionibacterium propionicum: HMPREF9154_0696
Help
Entry
HMPREF9154_0696 CDS
T02180
Name
(GenBank) ABC transporter transmembrane region
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9154_0696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppc02000
]
HMPREF9154_0696
Transporters [BR:
ppc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HMPREF9154_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA
AAA_25
AAA_21
AAA_22
AAA_30
NACHT
NB-ARC
AAA_5
RsgA_GTPase
DUF6703
AAA_29
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AFN46617
LinkDB
All DBs
Position
complement(741592..743397)
Genome browser
AA seq
601 aa
AA seq
DB search
MSTQSSVSDAVPANAPRSVWDLVRSARGSMYLGFTLAALGAVFKVVPYIAIVEITRSLLA
GNPDSAHLWGWVIAAVVCMVVHSLSYTYALGNNHTAEARLRHELRQRLIGKLGVMNLGWF
SARSSGRIRQAVSNDTADIHSLVAHLAGDFANSLISLLVSLGYLFWLDWRFAGLLIGCYL
LLSVVVYATGMTGIRKVFDDYAEAERQLSDRTVELVDGIKEVKNFGMTAEVFGRFDEAQK
RFSKVSLVWMQKQSIGLSLIASLLRPGPVFAATMGLGLVFTLQGWLSPVTVVAFALVWVG
LPEGLLTLMEMSQNLYAAKQAANSTLHILQAPELSEPNAEIAPEEEAPAVEFRDVSFSYD
PGEPVIQELSLKCPPGTVTALVGPSGGGKSTLARLIARFWDVDSGTVLVNGRDVRDQPSR
ELLSSMSLVFQDVMLSTDTVRANIALGNADATEHEIEEAARAACIHDRIMQLPDGYGTII
GEGAHLSGGEAQRLTIARAFLAASPILILDEATAQADSHSECLIQQAISNLAQKRTVIVI
AHRLSTIQGVDQIAVIDAGRLVELGTHDDLLTQDGPYARLWRNQTNIAHALEGLRGKEQA
C
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcaatcttctgtttccgacgccgttcccgcgaatgccccgaggtccgtgtgg
gatctggtccgcagcgcacgcggctcgatgtacctggggttcaccctcgccgctctggga
gcggtgttcaaggtggtgccctacatagcgatcgtcgagatcacccgttccctactggcg
gggaacccggattccgcgcacctgtgggggtgggtgatcgccgctgtggtgtgcatggtg
gtccattcgctctcctacacctacgcgctggggaacaatcacaccgcggaggcgaggctc
cgtcacgagctccggcagcggctcatcggcaaactgggggtcatgaacctcggctggttc
tcggcccggagttcgggtcgcatccggcaggccgtctcgaacgacaccgccgacatccac
tccctggtggcgcacctggccggcgacttcgcaaattccctcatcagcctgctggtcagc
ctcggctacctgttctggctggactggcgcttcgccggtctgctgatcggctgctacctg
ctgctctcggtcgtggtgtatgcgaccggcatgacggggatcaggaaggtgttcgatgat
tacgccgaggccgagcggcagctttcggaccggacggtggaattggtggacggcatcaag
gaggtcaagaacttcggcatgaccgcagaagtcttcggacgtttcgacgaggcgcagaag
aggttctccaaggtttccctggtatggatgcagaagcagagcatcggcctgagcctgatc
gcatcgctgctgcggcccggcccggtgttcgccgcgacgatggggctggggttggtgttc
acgctccagggatggttgtcgccggtgacggtggtggccttcgccctggtgtgggtcggg
ctgcccgaggggctgctgaccctgatggagatgtcacagaacctgtacgcggcgaagcag
gccgcgaacagcaccctgcacatcctgcaggccccggagctgtccgaaccgaacgccgag
atcgccccggaggaggaagcccccgcggtggagttccgcgacgtcagtttctcctacgac
cccggggaaccggtcatccaggagctctccctgaaatgcccaccgggcacggtcacggcg
ctggtcggcccctccggcggcgggaaatccacgctggccaggctcatcgcacggttctgg
gacgtcgattccgggacggtgctcgtcaacgggcgcgacgtgcgggaccagccctcgcgg
gaactgctctcgtcgatgtcgctggttttccaggatgtcatgctcagcaccgacaccgtc
cgcgcaaacatcgccctcgggaacgcggatgcgaccgaacacgagatcgaggaggccgcc
agggccgcctgcattcacgaccgcatcatgcagcttcccgacggctacggcacgatcatc
ggtgagggcgcccatctctccgggggtgaggcgcagcgcctgacgattgcgcgggccttc
ctggccgcatcccccatcctgatcctcgacgaggcgacggcgcaggccgacagccattcc
gaatgtctgatccagcaggccatcagcaacctggcccagaaacgcacggtgatcgtgatc
gcccaccggctctccacgatccagggcgtcgaccagatagccgtgatcgacgcgggccgg
ctcgtcgagctgggcacccacgacgacctgctgacccaggacggcccctacgcccggttg
tggcggaaccagaccaacatcgcccacgccctggaagggctcaggggaaaggaacaggca
tgctga
DBGET
integrated database retrieval system
