Pseudopropionibacterium propionicum: HMPREF9154_0905
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Entry
HMPREF9154_0905 CDS
T02180
Name
(GenBank) fibronectin type III domain protein
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9154_0905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Big_5
Motif
Other DBs
NCBI-ProteinID:
AFN46450
LinkDB
All DBs
Position
981857..987949
Genome browser
AA seq
2030 aa
AA seq
DB search
MALVTRKRVETVLVGLVALSLGILALIHRGVPAADVDLNDGGVWVTNQTKRLVGHLNHES
QTIDGALRPPSSSFGVTQSAGNVLVRSSDTVHPVDVASLTFLGEAGVAGVLTAHGGNEVL
FADQSEGRVWATDTRGAASFSLTADPLLKGLDTPRIAVGVEGTGYVLTADGQLYTVTGSG
DQAVTRAQGRKLEGRLSDSAQLTVAGDKIVVLDGTTLTIDGHPVTNDGFAGGVLQQPSGP
SGTVVVATPSELLKVDISSGQVTRESIPNGKPAAPVQLEGCTYALWAESGYYVRDCGGDD
YERAQHPELAAAKQPVFRANRKVIVINDEVTGDVFLPLKQMVKVNNWEQVESQLVDEKQD
KESEETDKSQTREFSEEQHPPQAVDDELGARPGTATVLPVLSNDIDLDGDVLTAIIRDVP
SGVKISQAKEGRALRIEVPADAKDTITFTYQAFDGVDVSNVATVKVNIRAENENSAPHKI
RDSQVNLSERASAGYSVLADWVDPDGDPIYLQQATVEDDSLEMTWRPDGYVSVKDLGKGG
PGRRSVNLTVSDGRDAASGELAAQISPGSTNSPPVANNDHYVATVGHAITLDPRSNDTDS
DSDSLKLVEVSAAPDGVELKPDYQAGTIRFTASKAGNYTLVYGITDGPNNAKGRIRVDVI
DPNSSGLQPVPENDLGLLPANGSLTINALDNDFDPAGGVLAIQGVSQAGAPGLNIEVIKH
SLLRVTAPAGIDSPQSFTYTVSNGHASATAKVLVIPKEPPSTVQSPVAAPDSSVVRVGDL
VTVPVLSNDYSPADLDISLSSDLDVRSDPSLGEFFVSNGAIRFRAGSEAGTAEAIYTVRD
SQGNPASTTVTVNIRAKDEHNEQPTPKQIDSRTFAGSSVRIPVPLDGIDPDGDSVTLGGL
GSQVPKLGAVKVEGNYLVYDASKGASGTDTFTYRVLDRFGAEGEGLIRVGVVPPPAANQA
PVAVADEVAARPSTRLEIPALANDIDPDGDQLQLVKGSAAATDDSWDPKAQTRGQRIVVV
TPAQEGIYHLYYTITDGGGVSDRGVVTVRVASDVPPKAPVANDDVVPTSAIAGVDQVEVP
VLENDSDPDGVVSDLKVTAESPATVKGGTVTVPLADDRQIVLYTVTDSDGLSSRAAIVVP
GREAIPPAINTGRGQARVKAGEPLTIRFTDWVVTRPGRTARLTSVDSVVAGPGGSPEVGN
NGVRVIDDQTIEFTPAKNFSGQTTVSFEVTDGGSMDDSTALKSKLSLSVIVEGDGQQPPQ
LRPTQLRVAPDEAPQKISLSNMVSDPNPGDNDTMSYSLVSTDGPVQASVSGQELSVSVPK
GTPVGSTGSIVVQVHDGSTDPVNMTIPVTVIASTRPPMTISEIVERDGRVGNTASFDLTR
WVTNPFADTGGEITLVGSPQVRGSATVTSEGNVINVTPTDSGTGADTVDDVLVTFRVADA
TKDPSRERTGVIRVVVKDVPRAPTAVTAQYAGSQTARVSWTHSGWRGATPKGFTVFWQGG
SKNCGLQTTCDIPGLANSGRYTFTVKAEVAEGDLNSRSPRSEPSNEILVDALPSKPSAPT
AAFGDQQIALTWEAATVPGGGSPVTRYTVTMYPGGQKQETTATSLTWTGLTNGQAYTFTV
TAHNRLTDENSQLTPPTSDESRPETPAGAPSNQGAPTVSMDSSSSSVKPRANIKWSPPGN
PNGDSNFRYVVTDANGKEVCPEQQDTSCTTPMDPSTETVTFSVRSTNKSGKWSAASPASN
AVRAFQPPGAPSGFSLRPTGKGSEVEFSFGAASGNGVRADEITYRWSAGSQSGTVKPGRT
VVSSPAFQLGQAVTVRLVAVANVLGQTSEGEAATATVTAYGPPQAPVVNSEPGVDHVTLR
WQVPGSSNGARVKQVEITSTVKAEGRNPSVETWTTTDLSGSVDKGNDRKQNVCVKARTQN
EHGDWSDYSAESCASTWGDTKATLSKGDSVECPDGGGRGCNAFKVTLQNWQPGGRVKCEV
PNPADQEDVAKVKVGPVDASGNASRQFSDWVFPENYNVPSEGFDITARCR
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtcacgcgcaaacgtgtcgagaccgtactggtcggtctcgtcgcgctctcc
ctcggtatcctcgcgctgattcaccggggggttccggccgccgacgtcgacctgaacgac
ggtggcgtctgggtgaccaaccagaccaagcggctggtggggcacctcaaccacgaatcc
cagaccatagacggcgcgctccgccctcccagcagttccttcggggtgacccagtccgcg
ggcaacgttctggtgcgcagttcggacaccgtgcatcccgtggacgtggcctccctcacc
tttctgggtgaggccggggtggccggtgtgctgacggcacacggcggcaacgaggtgctc
ttcgcggaccagagcgagggacgggtgtgggccaccgacacccggggggccgcgagcttc
agcctcaccgcggacccgctcctgaagggcctggacacgccaaggatcgctgtcggcgtc
gaaggtaccgggtacgtgctgaccgcggacgggcagctgtacaccgtcacgggttcgggg
gaccaggcggtgaccagggcacagggacggaaactggagggaaggctctcggactccgcc
cagttgacggtggcgggggacaagatcgtggtgctggacggcaccaccttgaccatcgac
gggcaccccgtgacgaatgacggctttgcgggcggggtcctccaacaaccgtcgggaccc
tccgggacggtggtcgtggccacgccctcggagctgctcaaggtggacatctcctcgggg
caggtgacccgggagagcatcccgaacggcaaaccagccgcgcccgtgcagctcgaggga
tgcacctatgcgctgtgggcggaatcgggctactacgtccgcgactgcgggggagacgac
tacgaacgggcccagcatcccgagcttgccgctgccaagcagccggtcttccgcgccaac
cggaaggtgattgtcataaacgacgaggtcaccggtgacgtcttcctgcccctgaagcag
atggtcaaggtgaacaactgggagcaggtcgagtcccagctggtggacgaaaaacaggac
aaggaatcagaggagacggacaagtcccagacccgggagttctcggaggagcagcaccca
ccgcaggccgtcgacgacgagctgggggcgcgaccgggaaccgccaccgtgcttcccgtc
ctgagcaacgacatcgacctcgacggcgacgtgctgacagcgataatccgggacgtcccc
tcaggtgtgaagatctcccaggccaaggaaggccgtgcgctccgcatcgaggtgcccgcg
gacgcgaaggacacgatcaccttcacctatcaggccttcgacggggtggacgtgtcgaac
gtcgccaccgtgaaggtcaacatccgcgccgagaacgagaattccgccccccacaagatc
cgcgacagccaggtcaacctcagcgaacgggcctccgcgggatactcggtgctcgcggac
tgggtggacccggacggagaccccatctacctccaacaggccaccgtcgaggacgacagc
ctggagatgacgtggcgtcccgacgggtacgtctccgtgaaggacctcggcaagggaggt
ccgggccggcgttcggtgaacctgacggtctccgacggcagggacgcggcctcaggggag
ctggcggcacagatatcaccgggctccacgaactctccgcccgtggccaacaacgaccac
tacgtagccaccgtcgggcatgccatcaccctcgacccgcgcagcaatgacacggattcc
gactccgattccctgaagctcgtggaggtctccgccgcccccgacggggtggaactcaaa
cccgactaccaagcggggacgatccgttttacggcctcgaaggcagggaactacacgctg
gtctacgggatcacggacggccccaacaacgcgaagggccgcatccgtgtcgatgtgatc
gacccgaactcgtcgggactccaaccggtgcccgagaatgatctgggattgctgcccgcg
aacggttccctgacgatcaacgcgctcgacaacgacttcgaccccgcgggtggggtgctg
gccattcaaggggtgtcccaggccggggctcccggactgaacatcgaggtgatcaagcac
tcgctgctccgggtcaccgccccggcgggcatcgattcaccgcagagcttcacctacacc
gtcagcaacgggcacgcatcggcgacggcgaaggtgttggtgatcccgaaggaacccccc
tccacggtgcagtcccccgtcgccgcccccgacagctcggtggtgcgggttggggacctg
gtcaccgttccggtgctgagcaacgactactccccggcggatctggacatctcgctgtcg
tcggacctcgatgtgcgttccgacccgtcgctgggtgagttcttcgtctccaacggcgcg
atccggttccgggcaggcagcgaggccggcaccgcggaggccatatacacggtccgggat
tcgcagggcaacccggcctcgacgacggtgaccgtgaacatccgcgccaaggacgagcac
aacgaacaaccgaccccgaaacagatcgactccaggaccttcgccggctcctccgtgcgg
ataccggtgccgctggacggcatagaccccgacggcgactcggtcaccctgggtgggctc
gggagccaggtgccgaaactcggggcggtgaaggtcgagggaaactacctcgtctacgac
gcgtcgaagggggcgtccggcaccgacaccttcacctaccgggtgctcgaccgtttcggg
gccgagggggagggcctgatccgcgtcggcgtagtgccgcccccggcggccaatcaggcc
cccgtggcggtggccgacgaggttgcggccaggccgtccaccaggctggagatcccagcc
ctggccaacgacatcgacccagacggggaccagctgcagctggtgaagggatccgcggcc
gccactgacgacagctgggatccgaaggcgcagaccagggggcagcggattgtcgtggtc
acccccgcccaggagggcatctaccacctgtactacacgatcacggatggtggcggggtc
tcggaccggggggtcgtcaccgtccgggtcgcctcggacgtgccaccgaaggcgcccgtc
gccaacgacgacgtggttcccacttccgcgatcgcgggggtggaccaggtcgaggtgccc
gtgctggagaacgactccgatccggacggggtggtctccgacctgaaggtcaccgccgag
tccccggcaaccgtcaagggcgggacggtcacggtgcccctcgccgatgaccggcagatc
gtgctctacaccgtcaccgactccgacgggctttcctcgcgtgccgccatcgtggtgcct
ggtcgtgaggccattccacccgcgatcaacacgggcaggggacaggcgcgcgtcaaggcg
ggggagccgttgacgatccggttcacggactgggtggtcaccaggcccggacgcacggcg
cgcctgaccagtgtcgactcggtggtcgccgggccggggggcagccccgaggtgggcaac
aacggcgtccgggtgattgacgatcagaccatcgagttcaccccagccaagaacttctcg
ggacagaccacggtctccttcgaggtcaccgacggcggatccatggacgactcgaccgcg
ctcaagagcaaactcagcctcagcgtcatcgtcgagggcgacgggcagcaacccccgcag
ctgagacccacccagctcagggtggcccccgacgaggcaccccagaagatctcgctgagc
aacatggtctcggacccgaacccgggtgacaacgacaccatgtcctactctttggtgagc
accgacggaccggtgcaggccagcgtctccgggcaggaactcagcgtttccgtgcccaag
ggcaccccggtgggttccaccggttcgattgtcgtccaggtccacgacggctccaccgat
ccggtcaacatgaccatcccggtcaccgtgatagcctccacccggcctcccatgacgatc
tcggagatcgtcgaacgcgacgggcgggtcggcaacacggcctccttcgacctgacccgg
tgggtcaccaacccgttcgcggacacgggaggggagatcaccctggtcggcagcccgcag
gtccgtggatcggccacggtcaccagcgagggcaacgtcataaatgtcacccccacggat
tccgggaccggagccgacaccgtcgatgacgtcctggtcaccttccgggtcgccgacgcc
acgaaagatccctccagggaacgcacgggagtgatccgcgtcgtcgtgaaggacgttccc
agagcacccacggcggtgacggcccagtacgcgggctcccagaccgcccgcgtctcctgg
acccacagcggatggcgcggcgccaccccgaaggggttcaccgtcttctggcagggaggc
agcaagaactgcggcctccagaccacctgcgacatcccggggctggcgaacagtggccgc
tacaccttcaccgtcaaggcggaggtggccgagggcgacctcaactcccgcagcccgcgc
tccgagccgagcaacgagatcctggtggacgcgctgccatcgaaaccctccgcccccacc
gcggccttcggggaccagcagatcgccctgacatgggaggccgccaccgtcccgggcggc
ggatcccccgtcacgcgctacaccgtcacgatgtacccggggggccagaaacaggagacc
accgcaaccagcctcacgtggacgggcctgacgaacgggcaggcctacaccttcacggtc
acggcccacaaccggctgaccgacgagaacagtcagctcaccccgccgaccagtgacgag
tcgcggcccgagaccccggccggtgcgccgtcgaaccagggggctcccaccgtgagcatg
gacagcagttcgagttcggtgaagcccagggcgaacatcaaatggtccccgcccggaaat
ccgaacggggactcgaacttccgttacgtggtgaccgacgcgaacgggaaagaggtgtgc
ccggagcagcaggacaccagctgcaccaccccgatggatccctccaccgagaccgtcacc
ttctcggtgcgctccaccaacaagtccggcaagtggtccgcggcctcgcctgcctcgaac
gccgtgcgcgccttccagccgccgggtgcgccaagtgggttctccctgagaccgaccggc
aagggatcggaggtggagttcagcttcggcgcggcctccgggaacggggtcagggcggac
gagatcacctaccggtggagcgcaggcagccagtccggcacggtgaaacccggcagaacg
gtggtcagcagccccgccttccagctgggacaggcggtgaccgtgcggttggtggccgtg
gcgaacgtgctgggacagacctccgagggggaggcggcgaccgccaccgtgacggcctac
gggccgccccaggcgcccgtggtgaacagcgagcccggggtggatcacgtgaccctgcgc
tggcaggtgcccggctccagcaacggcgcccgggtcaagcaggtcgagatcaccagcacg
gtgaaggccgaaggcaggaaccccagcgtcgagacgtggacgaccaccgatctctccggc
tccgtggacaaggggaacgaccgcaagcagaatgtctgcgtgaaggcgagaacacagaac
gaacacggcgactggagcgactactccgccgagtcctgcgcctcgacctggggggacacc
aaggcgaccctgtccaagggcgattcggtcgagtgcccggacggagggggacggggatgc
aatgccttcaaggtgacgttgcagaactggcaacccgggggacgtgtcaagtgtgaggtg
cccaaccccgccgatcaggaagacgtggccaaggttaaggtggggccggttgacgccagc
ggaaacgcgagcaggcagttctcggactgggtgttcccggagaactacaacgtcccctca
gagggattcgacatcactgcccggtgcaggtga
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