Pseudopropionibacterium propionicum: HMPREF9154_1270
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Entry
HMPREF9154_1270 CDS
T02180
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppc
Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppc03016
]
HMPREF9154_1270 (truB)
Enzymes [BR:
ppc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF9154_1270 (truB)
Transfer RNA biogenesis [BR:
ppc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF9154_1270 (truB)
Prokaryotic type
HMPREF9154_1270 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFN47333
LinkDB
All DBs
Position
1393852..1394715
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AA seq
287 aa
AA seq
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MSAESGVVVVDKPAGVTSHQVVGRLRRLLGTRRIGHAGTLDPMATGVLILGVNRATRLLG
HLALHDKRYLATVRLGQGSTTDDADGEVAAVADASGITPGDLEPALASLRGRIQQVPSAV
SAIKVNGKRAYDLARRGMEVELKAREVEVTRLDVLASHPGEGILDVDIDVECSSGTYVRA
IARDLGKSLGVGGHLTALRRTRIGSYDLSVAVELGEDPPTMMSMADAAKRSFPCVTVDLG
RAADVGFGRRLDMTVPADVTGILSPAGELLALYRPDGDGAKPVAVLV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaatccggcgtcgtcgtggtcgacaaaccggcgggggtgacctcacaccag
gtggtggggcgcctccgccggctgctcggcacccggaggatcgggcacgccgggaccctc
gaccccatggccaccggggtgctgatcctcggtgtgaaccgggccacccggctgctgggg
catctcgccctgcacgacaaacgctacctggccaccgtacgtctcggtcagggatccacc
accgatgacgccgacggtgaggtggccgcggtggccgacgcatccgggatcaccccgggc
gacctggaaccggcgctcgcctcgctgcgcggcaggatccagcaggtgccgtcggcggtt
tcagcgatcaaggtgaatggcaaacgcgcctacgacctggcaaggcgcgggatggaggtg
gaactgaaggcgcgagaggtggaggtgacccgcctggacgtactggcctcccaccccggg
gaggggatcctcgatgtggacatcgacgtggaatgttcctccggaacctacgtgcgcgcc
atcgcccgcgacttggggaagtccctcggggtcggtgggcacctgaccgccctccgacgc
acacggatcggcagttacgacctgtccgtggccgtcgaactgggcgaggatccccccacg
atgatgtccatggcggatgctgccaagcgcagctttccctgcgtcacggtggatctcggg
agggcagcggacgtgggtttcggacgccgcctggacatgaccgtgcctgccgacgtgacc
gggattctctccccggcgggcgaactgctcgccctgtaccgccccgacggtgacggcgcg
aagcccgtggcggtgctggtgtga
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