Pseudopropionibacterium propionicum: HMPREF9154_1522
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Entry
HMPREF9154_1522 CDS
T02180
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03420
Nucleotide excision repair
ppc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF9154_1522
03430 Mismatch repair
HMPREF9154_1522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_1522
Enzymes [BR:
ppc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF9154_1522
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF9154_1522
MMR (mismatch excision repair)
Other MMR factors
HMPREF9154_1522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFN47740
LinkDB
All DBs
Position
1656207..1659338
Genome browser
AA seq
1043 aa
AA seq
DB search
MKPLNDPGDLCEALGIPFSPEQLNAICAPLEPQVIVAGAGTGKTTVMAARVVWLVGTGQV
RAEQVLGLTFTRKAAAELGGRICHALERADLASRDETEGGEMVLTYDAFAARLVREHGLR
LGIEADARLLSGASRFRVAARAVAEHPLPLEHLSRLSPRQLPERVLALDAALGSHLATPA
QVREFSLRARARFEKAPLWRGSPTKAVLEAQGAIDERLELLELVETYRELKKKLGLVEFA
DQQAQAVELAQSFPAVGATLRQRFRVVLLDEYQDTSSAQAILLRALFSGADTASGRGFPV
TAVGDPNQAIYGWRGAAASNILGFPTHFPGATGEPAKEFTLTINRRSGSRILEVGNALAE
PLTRNRGGGVELSPGEGAPDGEVRVLCFDTLAEELDWLATDVTARHAEGTAWRDIAVLTR
RNDVLTSVWERLREHDVPVEIVGIGGLLRLPEIAPVVATLKVLADPLANAEVAGLLTGER
WRLGLADLAALARRARELAPGEAAEEPLPLPEELTELVSRADPACAPSLLDAMNDPGQAA
ISDEGRARLERFTSELAELRRHLDEPVPELVRRVISRIGLEAEQLVRGDTSQLARFIAAC
STYPDIDGDGSLAGLLAWLDAEEEHGDALERATPTAADSVKLLTVHRAKGLEWHTVYLPA
LSEGVFPGTDRTGNWSTNSRLLPAPLRGDADAIPQLADYSKRGIDAYREELKQEHRLSED
RLAYVAATRAKRLLVVSAHTWAPGLKRARGRSRYFEDAAALHEGSSMPPPPEENPRPTAA
RTAAWPVPVTDRAAATAHAAALVRQAREVIASGGDETGWVWGSGVASAAEQERIAAWDRD
AAFLAEQLTRRTNRNLTLPAGLSATALMELRKNPVGFAERLARRMPREPKRSTRLGERFH
EWVMARFSVSPGFDELEFRARAEEPELERLKRAFEASRFANLTPLGIEVPFLLRWESLVL
RGRIDAVFPSDDPAFDALVVDWKIGDSNADPLQLAIYRQAWAKARGLEPGRVATAFHHVL
ANRLEPVVASPELIRAATAAIIP
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactgaacgaccccggcgacctgtgcgaggcactcggaatcccgttcagcccg
gaacagctgaacgctatctgcgccccgctcgaaccacaggtgatcgtcgccggagcgggt
acggggaaaaccacggtcatggccgcccgggtcgtgtggctggtgggcaccgggcaggtg
cgggccgagcaggtcctcgggctgaccttcacccggaaggccgccgcggagttgggaggg
cgcatctgtcacgccttggaacgggccgacttggcctcccgggacgagacggagggcggc
gagatggtgctcacctacgacgccttcgccgcccggctcgtccgggaacacggcctgagg
ctgggcatcgaggccgatgccaggctgctgtccggggcttccaggttcagggttgccgcc
cgggcggttgccgagcaccccctgcccctcgaacacctgtcccggctgtcccctcgccag
ctcccggaacgggtgctggccctggatgcggccctgggatcacacctggcaacgcccgcg
caggtcagggagttctccctgcgggcccgggcccggttcgagaaggcaccgctgtggcgg
ggatcaccgacgaaggcggttctcgaggcccagggggccatcgacgagcgtctggagttg
ttggaactcgtcgagacctaccgggaactcaagaagaaactcggcctggtggaattcgcc
gaccagcaggcccaggcagtggaattggcgcaatcattccccgcggtcggcgccacgctc
agacaacggttccgggtagtcctgctcgatgagtaccaggacacatcgtcggcgcaggca
atcctgctgcgcgcactgttcagcggcgccgataccgcgtcgggccgcgggtttcccgtg
accgccgtcggggatccgaaccaggcgatctacgggtggcgcggagcagccgcctcgaac
atccttgggtttcccacccacttccccggggcaacgggggaacccgcaaaggagttcacg
ctcaccatcaaccgccgcagcggcagccggatcctggaggtgggcaacgccttggccgag
ccgctcacgcgcaacaggggcgggggggtggaactaagccccggggagggtgcacccgat
ggtgaggtccgtgtcctgtgcttcgacaccctcgcggaggaactcgactggctggcgacc
gacgtcacggcccggcatgccgagggcacggcatggcgggacatcgccgtcctgacccgc
cgcaacgacgtcctgacctcggtgtgggaacgtctccgcgaacacgacgttcccgtggag
atcgtcggtatcgggggcctgcttcggctaccggagatcgcccccgtggtggccaccctg
aaggtactcgccgaccctttggcaaacgccgaggtggccgggctgctcaccggggaacgc
tggcggctcggtctggccgatctggccgcgctggcgcggcgcgcccgggagctggcgccg
ggggaggccgcggaggaaccgcttccgttgcccgaggaattgaccgaactcgtctcgcgt
gccgatccggcttgcgcaccctcgctgttggacgccatgaacgatccggggcaggccgcc
atcagcgacgaggggagggcgcggctggaacggttcacctcggaactcgccgagctgcgc
aggcacttggacgagcccgtccccgagctggtgcgccgcgtgatctcccggatcggcctg
gaggccgaacaactggtgcgcggggacacctcccagcttgcgcggttcatcgcggcctgc
tccacctaccccgacatcgacggcgacgggagcttggccgggttactggcatggctggat
gccgaggaggaacacggggacgcgctggaacgcgccacaccgaccgcagccgattcggtg
aagctgctcaccgtccaccgggccaagggactggaatggcacacggtctacctgccggcg
ctgtcggagggggtgtttcccgggaccgaccggacgggaaactggagcacgaattcgcgt
ctgctgcccgcgccgctcaggggagacgcggatgcgatcccccagctcgccgactactcc
aagcggggcatcgacgcctaccgggaggagttgaagcaggagcaccggctctccgaggac
cggctggcctatgtcgccgccaccagggcgaaacgactgctcgtcgtctcagcccacacc
tgggcgcccgggctgaaacgggcacgcggccgttcacgctatttcgaggatgcggcagca
ctccacgagggatcctccatgccgcctcccccggaggaaaatccccgacccacggctgcc
cggaccgcggcctggcccgttcccgtcacggaccgggcggccgccacggcccacgccgcg
gccctggtccgtcaggcgcgggaggtgatcgcatccgggggggacgagaccggctgggtc
tgggggtcgggcgtcgcctcggcggcggaacaggagaggatcgcggcgtgggaccgggac
gctgctttcctggccgagcaactgacccggaggacgaaccggaacctgaccctgcccgcc
ggcctgtcggccaccgcgctcatggaactgcggaagaacccggtgggtttcgccgagcgc
ctggcgcgccggatgccgcgggaaccgaaacgcagcacgcggctgggggagcggttccac
gaatgggtgatggcgcggttctccgtcagtcccggtttcgacgaactcgagttccgggct
cgcgcggaggaacccgagctggaacgcctcaaacgggccttcgaggcaagccggttcgcg
aacctgacgccactcggaatcgaggttccgttcctgctccgctgggaatcgctggtgctg
cgcgggcggatcgacgcggtctttcccagcgacgacccggccttcgatgcgctcgtggtc
gactggaaaatcggtgattcgaatgcggacccactgcaactggccatctaccgacaggcc
tgggccaaggcccgtggcctggaaccgggacgggtggccactgccttccaccacgtcctg
gccaaccgtctggagccggtggtggcgagcccggaactgatccgggccgcaacggcggca
atcattccttga
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