Pseudopropionibacterium propionicum: HMPREF9154_1702
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Entry
HMPREF9154_1702 CDS
T02180
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HMPREF9154_1702 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppc03016
]
HMPREF9154_1702 (trmU)
Enzymes [BR:
ppc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HMPREF9154_1702 (trmU)
Transfer RNA biogenesis [BR:
ppc03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HMPREF9154_1702 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
ThiI
QueC
Motif
Other DBs
NCBI-ProteinID:
AFN47293
LinkDB
All DBs
Position
complement(1839491..1840564)
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AA seq
357 aa
AA seq
DB search
MKVLAAMSGGVDSAVAAARLVAAGHDVTGVHLALNRNPQPYREGSRGCCSLEDAHDARRA
ADLLDIPFYVWDFSEQFQAEVVDDFIAEYRAGRTPNPCLRCNEKIKFAAVLERGLALGFD
AVATGHYARVVDNGSELELHRAADPDKDQSYVLGVLNQDQLRRSLFPLADTPKPQVRAEA
HSLGLRVADKPDSYDICFIPDGDTQGYLRAHLGETPGPIVDRSGTELGRHRGHHGFTIGQ
RKGLDLRVPAPDGNPRYVLRIEPASNRVVVGPGESLLVTNLAGIRPTWTQHRVPGSWRGQ
VQYRAHGAALSATITTTGDDQVRVELDEPTRGVAPGQSMVFFDATRVVGSATISGTS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtactggcagccatgtcgggcggggtcgactccgccgtcgcggcggcgcgcctc
gtcgccgccggccacgacgtgaccggggtgcacctggcgctgaaccgcaacccgcagccc
taccgggaggggtcgcgcggctgctgttccctggaggacgcccacgacgccaggcgcgcc
gccgacctgctggacatccccttctacgtgtgggatttctcggagcagttccaggcggag
gtggttgacgacttcatagccgagtaccgcgcgggccgaaccccgaacccgtgcctcagg
tgcaacgagaagatcaagttcgcggctgtgctggagcgcgggctcgcgctcggtttcgac
gccgtcgcgacgggacactatgcccgggtcgtggacaacgggtcggaactggaactgcac
cgcgccgccgacccggacaaggaccagtcctacgtgctcggcgtgctgaatcaggaccag
ctgcgccgctccctgttcccactcgccgacacgccgaaaccgcaggtgcgggcggaggcc
cattcgctgggcctcagggtcgcggacaaacccgactcctacgacatctgcttcatcccc
gacggggatacccagggctatctgagggcccatctcggcgagaccccggggccgatcgtg
gaccgttccggaaccgagctcggacggcacagggggcatcacggtttcaccatcgggcag
cgcaagggactcgacctgcgcgtccccgcgccggacggcaacccccgctacgtgctgcgg
atcgaaccggccagcaaccgcgttgtcgtcggccccggggagtcactgctggtcaccaac
ctcgcgggtatccgccccacctggacccagcacagggtgcccggaagctggcggggacag
gtgcagtaccgggcccacggcgcggcactgtccgccaccatcaccaccactggggacgac
caggtgcgggtggaactcgacgaaccgacacgcggggtggcgcctggacagtccatggtg
ttcttcgacgccacccgggtggtcggctccgcgacgatcagcgggacctcgtga
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