Pseudopropionibacterium propionicum: HMPREF9154_1752
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Entry
HMPREF9154_1752 CDS
T02180
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03030
DNA replication
ppc03430
Mismatch repair
ppc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9154_1752 (holA)
03430 Mismatch repair
HMPREF9154_1752 (holA)
03440 Homologous recombination
HMPREF9154_1752 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppc03032
]
HMPREF9154_1752 (holA)
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_1752 (holA)
Enzymes [BR:
ppc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9154_1752 (holA)
DNA replication proteins [BR:
ppc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9154_1752 (holA)
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9154_1752 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DUF8669
GRASP_targ_2
Motif
Other DBs
NCBI-ProteinID:
AFN47452
LinkDB
All DBs
Position
complement(1892718..1893671)
Genome browser
AA seq
317 aa
AA seq
DB search
MNSFGRTLLVTGSESLLAARAIDGRRRAALAEEPDAEVNRVCGAELADSMLSEVTGGSLF
SNHIVAIIDDVGSTPPDVVDTLVALAKNPGDELCLILSHEGGNKGRGLIDKLKKARIETI
AVAAPKPWDLPKFCVEEARSRKVKLSQDAAGALVAAVGNDLRALTSAVAQLASDAGGEPV
DETLVRKYFAGRAEVTSFAVSDAVLAGDASLALERLRWALGSGVAPVLITSAMAGAFRGM
GKYLEARGSGADLARRIGVPPFKLKEYQRTSRNWQPAGVAAAIGIIARADADVKGAATNP
DYALERMVLGVLRQKRT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtttcggacgcaccctgctcgtcaccggttcggaatcgctgctggccgctcgt
gccatcgacggcaggcgccgggccgccctggcggaggaacccgacgccgaggtcaaccgg
gtctgtggggcggaactagccgattccatgctctcggaggtgacggggggttccctgttc
tcgaaccacatcgtcgccatcatcgacgatgtcggctccaccccacccgatgtcgtcgac
accctggtggccctggcgaagaaccccggcgacgaactgtgcctgatcctgtcgcacgag
ggtgggaacaagggcaggggcctgatcgacaaactgaagaaagccaggatcgagacgatc
gccgtggcggcccccaagccttgggatctgccgaaattctgcgtggaggaggcgcggtct
cggaaggtgaaactctcccaggacgcggccggggcgctcgtggcggcggtcgggaacgac
ctgagggcactcacctcggcggtcgcacagctcgcatccgatgccggcggtgagccggtg
gacgagaccctggtgcggaagtatttcgcgggccgggcggaggtcacctcgttcgcggta
tccgatgccgtgctggccggtgacgcgtcgctggcgctggaacgtctccgctgggccctt
ggctctggcgttgcccccgtgctgatcacatccgccatggccggtgcgttccgcggcatg
ggcaagtacctggaggcgcgggggagtggcgccgatctggcccggcgaatcggggtgccg
ccgttcaaactgaaggagtaccagcgcacctcccggaactggcagccggccggggtggcc
gcggccatcgggatcatcgcccgggccgacgcggatgtcaagggtgcagccaccaacccg
gactacgcgcttgaacgcatggtgctcggcgtcctccggcagaaacgaacctga
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