Pseudopropionibacterium propionicum: HMPREF9154_1867
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Entry
HMPREF9154_1867 CDS
T02180
Name
(GenBank) SNF2 family N-terminal domain protein
Organism
ppc
Pseudopropionibacterium propionicum
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AFN45871
LinkDB
All DBs
Position
complement(2027419..2030613)
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AA seq
1064 aa
AA seq
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MDPHSTAWVTEVSDEAIRASWGDATFLRGRSYEASGHVLKYSTDRTGSIEAVVKGSGRKV
YRTFLHHDHRGINSACSCPMRMGCKHAVAVLLAARESAMETVSPASSWENALAGLLPTTE
TEGRPVELGLEFRIDGPLEQPNGLVLRPLRLGKQGWIKSQAGWLDIVTNYRGVNYEPAQR
EVLLQMARLTGRHQYTYSTPASVSLSDLGPLGWSLLSQGVDAGIQLIAGQGFQDVEVGFE
PVRIWLDVDLRDDGSRQLAMSGDLGPVPPGSRRFLIGEPAHGVGELGPGGRLRLRPLAGT
VPDAIRGLFNRNLTVTIPAQDAGRFQLMYLPALVQRGLVPPGTWDPEDLPHPELTLGLTH
EPGHRMLLEWGFRYVAGETTVDVAFHPRAGESFRDQEAEQILEEVALRLVGDHPNLREPH
WQRLNPNATVIRADAARFVTETLPLLEGEGIIVTHHGETPEYSRATEAPVISVGAEDTGD
NDWFNLHVRVTVAGRDVPFEQLFRALAAGDEAMLLDDGTWFPLDRPELDRLRQLLAEARE
LVDPGPGRQLRISAYQAGIWEELAELGVVEEQSRRWRERVQTLLNLGSDETRITVPDGLD
AVLRPYQEQGLTWLAALWDADLGGVLADDMGLGKTLQSLALLERARELGQLDDAPVLVVA
PASVVGTWAEEAARFAPGLRVAVIRATRARRGTELAEEIRGAHLVVTSYTLLRMEDEAYL
EQKWRGLVLDEAQFVKNHRSRTYQVARRIGAPFTLAITGTPLENSLGDLWSMFSLAAPGL
FPRLEGFTENYRKPVEKNGETDVLGRLRARIRPFMLRRTKREVVKELPEKVEQITRLELT
PAHRRRYDQHLTRERTRVLGMLEDMDRNRVAIFRALTKLRQLALDPRLVDTDLPPIPSAK
ITALLGQIQELAEEGHRALVFSSFTGFLKLVRGTLEAEGIEYVYLDGRTRDRPARIARFR
EGGAPVFLISLKAGGFGLTLTEADYVFVLDPWWNPAAENQAVDRAHRIGQTRAVNVYRMV
SADTIEEKVVALQQRKRDLFASVVDTGEFRSAAITATDIRGLLE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatccccactcaacagcttgggtcacggaggtcagcgacgaggccatccgagcttcc
tggggtgatgccacgttcctgcggggacgttcctacgaggcctccgggcacgtcctgaag
tactccacggaccgcaccggctccatcgaagcggtggtcaagggcagcggaagaaaggtc
taccggacgttcctccaccacgaccaccgagggatcaacagcgcctgctcgtgcccaatg
aggatgggatgcaaacacgccgtggcggtgctgcttgccgcgcgggaatcggcgatggag
accgtttccccggcgtcctcctgggagaacgcgctggccgggctgctgcccacaaccgag
accgaggggaggcccgtcgaactcggcctggagttccggatcgacggtccactggagcag
ccgaacggactggtgttgcgtcccctgcggctcgggaaacagggctggatcaaatcccag
gccggctggctggacatcgtcacgaattaccggggggtgaactacgaacccgcgcaacgc
gaggtcctgttgcagatggcgaggctcacggggcgccaccagtacacctacagcaccccg
gcctcggtttccctgtccgacctcggcccactgggctggtcgctcctgagtcagggcgtg
gacgccggaatccaactgatcgcgggccagggattccaggacgtggaggtcggattcgaa
ccggtcaggatctggctggacgtcgatctccgagacgacggatcgcgacagctcgcgatg
tccggggacctggggccggtgcccccgggcagtcggcgattcctgatcggggaaccggcc
cacggggtgggggagctgggaccgggcggccggttgcgtctgcgcccactggccgggacg
gtacccgacgcgatccgcgggttgttcaaccggaacctgacggtcacgatcccagcccag
gacgcagggcggttccagctgatgtatctcccggcgctggtgcagagaggactcgtccca
ccgggcacgtgggacccggaagacctcccacacccggaactgaccctcggtctgacccac
gaacccggccaccggatgctgctcgaatggggtttcaggtatgtagcgggggaaaccacc
gtcgatgtcgcgtttcatccccgggcgggggagtccttccgggaccaggaggccgagcaa
atcctcgaggaggtcgcgctccggttggtcggggaccacccaaacctgcgggaaccgcac
tggcaacgactgaatccgaatgcgacggtgatccgggccgatgcggcacggttcgtcacc
gagaccctgcccctcctggagggggagggaatcatcgtcacccaccacggcgaaaccccc
gagtactcgcgcgccaccgaggccccggtgatttcggtcggcgcggaggacaccggcgac
aacgactggttcaacctccacgtccgggtcaccgtcgccggccgcgacgtgcccttcgaa
cagctcttccgggcgctcgccgcgggcgacgaggcgatgctgctggacgacgggacatgg
ttcccgctggaccgccccgaactcgaccggctgcggcagctcctcgcggaggcccgggaa
ctcgtggaccccggcccgggcaggcaactgcggatcagcgcctaccaggcaggcatttgg
gaggaactcgcggaactgggggtcgtggaggaacagtcacggcgctggcgggaacgcgta
cagaccctgctgaacctcggttccgacgagacgaggatcacggtcccggacgggctggac
gcggtgctgcggccctaccaggagcagggactcacctggctcgccgcgctctgggacgcg
gacctcggcggcgtgctcgccgacgacatggggctcgggaaaacccttcagagcctggcc
ctgctggaacgcgcccgggaactcggccaactcgacgacgcgccggtgctcgtcgtggcc
cccgccagcgtcgtcggcacctgggcggaggaagccgcccggttcgcgcccggcctgagg
gtcgccgtcatccgggccacccgggcccggcggggcacggaactggccgaggagatccgc
ggcgcgcacctggtggtcacctcctacacccttctgcgcatggaggacgaggcatacctg
gaacagaaatggcgtggcctggtgctggacgaggcccagttcgtcaagaaccaccgctcc
cgcacctatcaggtggcgcgccgcatcggggccccgttcaccctggccatcaccggcacc
ccgctggagaactccctcggcgacctgtggtcgatgttctcgctcgccgcgccggggctg
ttcccgcgtctggagggtttcaccgagaactaccgcaaaccggtggagaaaaacggcgag
accgatgtcctggggcggctgcgcgcccggatccggccgttcatgctgcgccgcaccaaa
cgcgaggtggtgaaggaactgcccgagaaggtggaacagatcacgcggctggaactcacc
ccggcgcaccggcgccgctacgaccagcacctgacccgggaacgcacccgggttctcggg
atgctcgaggacatggaccggaaccgggtggcgatcttccgggccctgacgaaactgcga
caactcgccctggatccccgcctggtggacaccgatctgcctcccatcccgtcggcgaag
atcaccgccctgctgggacagatccaggaactggccgaggaggggcaccgcgcgctggtg
ttctcctcattcaccgggttcctgaagctggtgcgcgggacactggaagcggagggaatc
gaatacgtctacctcgacgggcgcacccgcgaccggcccgcccgcatcgcgcggttccgg
gaaggcggcgccccggtgttcctgatctccctgaaggccggtgggttcggactcaccctc
accgaggccgactacgtcttcgtgctggacccgtggtggaatccagccgccgagaaccag
gccgtcgaccgggcacaccgcatcggccagacccgggcggtcaacgtctaccgcatggtc
tcggcggacaccattgaggagaaggtcgtggccctgcagcagcgcaaacgcgacctgttc
gcatccgtcgtcgacacgggggagttccgcagcgcagccatcaccgccaccgacatccgg
ggtctgctggaatag
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