Pseudopropionibacterium propionicum: HMPREF9154_2016
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Entry
HMPREF9154_2016 CDS
T02180
Symbol
rrmJ
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ppc
Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppc03009
]
HMPREF9154_2016 (rrmJ)
Enzymes [BR:
ppc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
HMPREF9154_2016 (rrmJ)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
HMPREF9154_2016 (rrmJ)
Ribosome biogenesis [BR:
ppc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HMPREF9154_2016 (rrmJ)
23S rRNA modification factors
HMPREF9154_2016 (rrmJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_12
SYY_C-terminal
TyrRSs_C
Methyltransf_11
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AFN45326
LinkDB
All DBs
Position
complement(2206380..2207117)
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AA seq
245 aa
AA seq
DB search
MRLDRALVARGLARSRTQATRLVVEGRVRVAGALAQKPAMNVDASTEISADTEKWVSRAA
HKLLGAIADSGTSLHGRVLDAGASTGGFTQVALEHGSDLVYAVDVGHHQLAAPIRSDPRV
RVREGLNLRDLSLADLDGEPVDVVVGDVSFISLKLLLPSLLGVIRPGGVALLLVKPQFEV
GKERLGAGGVVRDPRLREETVDAVVEAAGVLGWGCDWRGPSRLPGAGGNQEFFIRLCSVH
GAYYP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctggaccgggccctcgtggcccgcggcctggcacggtcccgcacccaggccacc
cggctggtggtggaggggcgggtcagggtggccggagccctagcgcagaaaccggcgatg
aacgtcgacgcctccaccgagatctccgccgacaccgagaaatgggtttcccgtgccgcc
cacaaactcctgggggcgatcgcggattccggaaccagcctgcacgggcgcgtgctcgat
gccggggcatccaccggcggattcacgcaggtggcgctggagcacggttcggacctggtc
tacgccgtcgacgtcgggcatcatcaactggcggcgccgattcgttctgatccgcgcgtg
cgggtccgggagggcctgaacctgcgcgatctcagcctcgccgatctggacggtgaaccc
gtcgacgtagtggtcggggacgtctcgttcatctccctgaagctcctgctgccatcactg
ctgggggtcatccgccccggcggggtggcgttgcttctggtgaaaccgcagttcgaggtg
ggaaaggaacgcctcggtgcgggtggggtggttcgtgacccccggctgcgtgaggaaacc
gtggatgccgttgtcgaggccgccggtgttctcgggtggggttgcgactggcgtggtccc
agccggcttcccggtgccggcggcaatcaggagttcttcattcgattgtgctcggttcac
ggcgcttattacccttga
DBGET
integrated database retrieval system
