Pseudopropionibacterium propionicum: HMPREF9154_2252
Help
Entry
HMPREF9154_2252 CDS
T02180
Name
(GenBank) peptidase, M23 family
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
ppc
Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppc01002
]
HMPREF9154_2252
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppc01011
]
HMPREF9154_2252
Peptidases and inhibitors [BR:
ppc01002
]
Cysteine peptidases
Family C40
HMPREF9154_2252
Peptidoglycan biosynthesis and degradation proteins [BR:
ppc01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
HMPREF9154_2252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
AFN46389
LinkDB
All DBs
Position
complement(2438484..2440112)
Genome browser
AA seq
542 aa
AA seq
DB search
MRLVKIFGMCLLLMFVMPLMTAVLGSVSPSERRNQEKNCSPSDGAASSAWSVPMGAAYRV
TAQFGPRVSPITGAPDMHTGIDLASPAGDAPVLAATAGEVVRIENLGNRSYGLWVEINHG
GGTTTRYAHLSSVSVRVGDRVNTGQQIAVEGKSGGVTGPHLHFEIRHDGEAVDPAKELME
RFGFSFDGVPGITFNGSRAITADDVAAFLPNPQGVDQSGSLTEEQIANATAIVETGQKLG
LPPKAWAIALMTALQESTLGADKSTTTPNSDVDVGIFQQRAKVGWYADGLSVEQNTAILN
DVRYAAATFYQGHDMSLIAYGLNPEGAAGPPGYHLPGLIDIKDWMNRKDLGEIAQAVQKS
DFPRHYTKHEATVAALLPRINTGIGSYECAPAAEGIPSNGTAGEQVAAYAMTQIGVPYSW
GGGDETGPTKGFCCSPGGKDGSAIVGFDCSGLVLWAWSKLGVKLPHESSAQQRMTTPVAK
ENIQAGDLLFFPGHVGIADGKGGMIEAPRPGLAVRVTPDVLNDPHYGPLFTGAGRPSLPN
KP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagtaaagatcttcggaatgtgcctgctgctgatgtttgtcatgcccttgatg
acagctgttctcggatcggtgtcaccttctgaaaggcgcaaccaagagaaaaactgctca
ccaagcgatggtgctgcatctagtgcatggagtgtcccgatgggtgccgcctacagggtg
actgcccagtttggtcctcgcgtctcgccgattacaggcgcaccggatatgcacaccgga
attgatctggcttccccggcaggggacgcacccgttctggctgctacggccggcgaggta
gtaaggattgaaaatctcgggaatcgatcatatgggttatgggtggagattaatcatggt
ggaggaacgaccacgcgctacgctcacctgtccagcgtatccgtaagagtgggtgatagg
gtcaacaccggacaacagatcgcggttgaagggaagtccgggggagtaacgggccctcat
cttcattttgaaatccgccacgacggtgaagccgtcgacccagccaaagaactgatggaa
cgcttcgggttttctttcgatggcgtgcctggcatcaccttcaacggttcacgagccatt
acggctgacgatgtggcggcatttctaccgaacccgcagggtgtggaccaatccggttcg
ctcacagaagagcagatcgccaacgcaactgccatcgtcgagacaggtcagaagcttggc
ctgccacccaaagcatgggcgatcgcattgatgacagcgctccaagaatccactctcggt
gctgataagagtaccaccacacccaacagtgatgtcgatgtcggcattttccaacagaga
gccaaagtaggatggtatgccgacggcttgtccgtagaacagaacacagcaatcctcaac
gacgtacgctacgcggctgcgaccttctaccaaggccacgacatgtcattaatcgcatat
ggactcaacccagagggtgcagcaggtccgcccggataccaccttcccggcctgatcgac
ataaaagactggatgaatagaaaagacttgggggaaatagcacaagcggtacagaaatcg
gacttccctcgccactacaccaaacacgaagccaccgtcgctgcactacttccccgaatc
aacacgggaatcggcagctatgaatgcgctcccgccgctgaggggatacccagcaacgga
actgccggagaacaagtggccgcttatgctatgacccagatcggtgtcccttacagttgg
ggcggtggggacgaaaccggcccaactaaaggtttctgctgctccccgggaggaaaggac
ggctccgcaatcgtcggtttcgactgctcaggcctcgttttgtgggcttggtctaaactc
ggagtgaaacttcctcacgagtcaagtgcacagcagcgaatgaccactcccgtagccaag
gaaaacatccaagctggagacctgctgttcttccccggacacgtaggcatagcggatggc
aagggcggcatgattgaagcaccacgcccaggacttgccgttcgggtgacacctgatgtt
ctcaatgatccccactacggaccactcttcacgggcgccggccgtccgtccctgccgaac
aagccgtaa
DBGET
integrated database retrieval system
