Pseudopropionibacterium propionicum: HMPREF9154_2369
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Entry
HMPREF9154_2369 CDS
T02180
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc00061
Fatty acid biosynthesis
ppc01100
Metabolic pathways
ppc01212
Fatty acid metabolism
ppc02024
Quorum sensing
ppc04146
Peroxisome
Module
ppc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMPREF9154_2369
00071 Fatty acid degradation
HMPREF9154_2369
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMPREF9154_2369
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9154_2369
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppc01004
]
HMPREF9154_2369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppc04147
]
HMPREF9154_2369
Enzymes [BR:
ppc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMPREF9154_2369
Lipid biosynthesis proteins [BR:
ppc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMPREF9154_2369
Exosome [BR:
ppc04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMPREF9154_2369
Exosomal proteins of breast cancer cells
HMPREF9154_2369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFN45000
LinkDB
All DBs
Position
complement(2551010..2552797)
Genome browser
AA seq
595 aa
AA seq
DB search
MIQHLAVQMRAAIAEHADRPATRIRVGDDWCTHTFREFGERIDEAAQGLLNRGIRPGDRI
GLFANNCPEWSEIDFGAATVRAIPVPIYATSTPEQIRHIAADSGLRILFVSGRSECERVL
EVADDLPELEHVVILEPWEGMLERVITYDDFRAEPEARALEARLAEAGPDDLASIIYTSG
TTGDPKGVMLRHSAMIAQKEAIEEMFHFGPEDHSLCFLPLSHALERAWTSIILLKGCMNT
YVPDARTVADALVQTKPTLLVSVPKLYEKVFATAHAKVAASGIKRGIFKWALRVGARNQR
AYRKGRRPAWFWRAQLGMADRLVLSSIRVALGGNKAVLACGGAPLRKEIEEFFSAVGMPI
YTGYGLTEASPLVTFNSPGGFKIGTAGRVLKGGQLHIGEHGEVLFRGPNVMAGYWNNEEA
TAAAIDSDGWLHTGDAGYVDVDGFLVITDRIKDIIVTLGGKNVAPQPIEGLILADPLFEH
AVLLGDNRPCVTLLVKPSLPHVEELGKLMQWPGEVADWLKSNELAEELRRRVTALTDKLP
SQEKPRATELMDGDLTTDNGLLTPTLKVRRRQVEERFKELIDGMYEALERRRRSS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcacctcgccgtacagatgcgcgcggccatcgccgagcatgccgaccgtcca
gccacccggatccgggtcggcgacgactggtgcacccacaccttccgcgagttcggtgag
cgcatcgacgaggcggcgcaggggctgctgaaccggggaatccggccgggcgaccgcatc
ggtttgttcgcgaacaactgccccgagtggtcggagatagacttcggcgccgccaccgtg
agggccatcccggtgcccatctacgccacctccaccccggaacagatccggcacatcgct
gccgattccgggctgcggatcctgttcgtgagcggccgcagcgagtgcgaacgtgtcctg
gaggtcgccgatgacctgcccgaactggagcacgtggtgattctcgaaccctgggagggc
atgctggaacgggtcatcacctacgacgacttccgggccgaacccgaagcccgggccctg
gaggcccgtctcgcggaggcaggccccgacgatctggcgtcgatcatctacacctccggt
accaccggcgacccgaagggggtgatgctcaggcactccgcgatgatcgcccagaaggag
gcgatcgaggaaatgttccacttcgggccggaggatcactcgctgtgtttcctacccctc
tcgcacgcgctggagcgggcctggaccagcatcatcctgctcaagggctgcatgaacacc
tacgttcccgacgcccgcaccgtcgccgatgccttggtgcagacgaaaccgacgctgctc
gtgagcgtccccaagctgtacgagaaggtgttcgcgaccgctcacgcgaaggtcgctgcc
tcggggatcaaacgtggcatcttcaagtgggcgctgcgggtgggggcccgcaaccagcgg
gcctaccgcaagggaaggcgacctgcgtggttctggcgcgctcagctcggcatggccgac
cggctcgtcctgtcctcgatccgcgtcgccctgggcggcaacaaggcggtcctggcgtgc
ggtggggcgccgctgcgcaaggagatcgaggagttcttctcggcggtcgggatgcccatc
tacaccggctacgggctgaccgaggcctcgccgctggtgaccttcaactcgccgggcggg
ttcaagatcggcacggcggggcgggtgctcaagggcgggcagctgcacatcggcgaacac
ggtgaggtgttgttccgcggcccgaacgtgatggccgggtactggaacaacgaggaggcc
accgcggccgccatcgactccgacggatggctgcacaccggggacgccggatacgtcgat
gtcgacgggttcctggtcatcaccgaccgcatcaaggacatcatcgtcaccttgggcggc
aagaacgtcgcgccgcagcccatcgagggcctcatcctcgccgacccgctgttcgagcac
gccgtcctgctcggcgacaaccggccctgcgtgacgctgctggtcaaaccgtcgctgcca
cacgtggaggagctcggaaaactgatgcagtggccgggtgaggtggccgactggctgaag
tccaacgaactggccgaggagttgcgccgacgggtcaccgccctgaccgacaaactcccg
agccaggagaaaccccgcgccaccgagctgatggacggcgacctcaccacggacaacggc
ctgctcaccccgacgttgaaggtgcgtcgccggcaggtggaggagcgtttcaaggaactc
atcgacggcatgtacgaggcactggaacggcgtcggcgctccagttga
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