Pseudopropionibacterium propionicum: HMPREF9154_2683
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Entry
HMPREF9154_2683 CDS
T02180
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HMPREF9154_2683 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_2683 (xseA)
Enzymes [BR:
ppc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HMPREF9154_2683 (xseA)
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HMPREF9154_2683 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AFN46247
LinkDB
All DBs
Position
2890918..2892135
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AA seq
405 aa
AA seq
DB search
MALTSSPEHPQPLARVVGAVADWVGRLGEIWVEAQVIEIKRRAAPTQFLTLRDRFADVSC
SVTTTAFVLDAAGPLPEGSQVRVRLKPRVWEPNASLSFECLELRVAGVGRLLAELDARRR
KLQAEGLFDPHRKRPLPLLPRRIGLITGKDSDAERDVLRNVARRWPARFTVAHSPVQGPG
AAASVIQALQDLDEDPEVDVIVIARGGGALEDLLPFSDEGLVRAVSACRTPVVSAIGHES
DTPLLDFVADLRASTPTDAASRIVPEFTAEQDLVALARTRLRQAIETRIGQAGQELAELR
RRPVLASPAAALEGHRDRLALLRHRLRTAIDQQLTSRRTELASHLSAVRALSPAATLQRG
YALLVDGDRTVSSIADAPVGGTLTAHLADGELTLTTQASHPKESR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccctgaccagttctcccgagcatccgcagccattggcgcgagtcgtcggcgcggtc
gcggactgggtgggcaggctcggcgagatctgggtggaggcgcaggtcatcgagatcaaa
cgccgcgccgcacccacccagttcctcaccttgagggatcggttcgccgatgtctcctgt
tcggtgacgaccacggctttcgtgctggatgcggcgggcccgctgccggaaggctcgcag
gtgcgggtgcgcctgaaaccgcgggtgtgggaacccaatgcgtcgctcagtttcgaatgc
ctggagctgcgggtggccggagtcggcaggttgctggccgaactggacgcgcggcgccgc
aaactccaggccgagggcctgttcgatccccaccgcaaacgcccgctaccgctgctgccc
cgccgcatcgggctgatcaccggcaaggattccgacgccgaacgcgacgtgctgcgcaac
gtggcccgtcgctggccggcacgtttcaccgtcgcacattcgccggtccaggggccgggt
gctgccgcgtcggtgatacaggccctccaggacctcgacgaggacccggaggtcgatgtc
atcgtcatcgcccgcggcggcggggccctggaggatctgctgccgttctccgacgagggc
ctggtgcgggcggtttctgcctgccgcaccccggtggtttctgccatcggacacgagtcc
gacaccccgttgctggatttcgtcgccgacctgcgggcctccacccccaccgacgcggcc
tcccgcatcgtcccggagttcacggccgaacaggacctcgtcgccctggcccgcaccagg
ctcaggcaggccatcgagacgcggatcggacaggcggggcaggaactcgcggagctgcgg
cgccgccccgtcctcgccagtcctgccgccgccctggaggggcaccgcgaccgcctcgcc
ctgctgcgtcaccggctccgcaccgccatcgaccagcagctcaccagcagaagaaccgaa
ctggcctcccacctttcggcggtcagggccctgtcccccgcggccaccctgcaacgcggc
tacgccctgctcgtcgacggcgaccgcaccgtctccagcatcgccgacgcccccgtcgga
ggcacgttgacggcccatctggccgacggcgaactcaccctcacaacgcaggccagtcac
cctaaggagtcccgatga
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