Pseudopropionibacterium propionicum: HMPREF9154_2694
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Entry
HMPREF9154_2694 CDS
T02180
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03030
DNA replication
ppc03430
Mismatch repair
ppc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF9154_2694 (holB)
03430 Mismatch repair
HMPREF9154_2694 (holB)
03440 Homologous recombination
HMPREF9154_2694 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppc03032
]
HMPREF9154_2694 (holB)
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_2694 (holB)
Enzymes [BR:
ppc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF9154_2694 (holB)
DNA replication proteins [BR:
ppc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF9154_2694 (holB)
DNA repair and recombination proteins [BR:
ppc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF9154_2694 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Mg_chelatase
AAA_5
bpMoxR
AAA_22
PhosphMutase
RuvB_N
Tropomyosin
ATG14
Motif
Other DBs
NCBI-ProteinID:
AFN47029
LinkDB
All DBs
Position
complement(2901433..2902623)
Genome browser
AA seq
396 aa
AA seq
DB search
MGNGSLVGGGWQDEHVSVWDELVGQDRAVETLRRAVAGGRHAMTHAWLFVGPPGSGRSNA
ARAFAAALQCHDGGCGRCNDCRTSLSGAHPDVTLLRTEQLSIGVDEMRQLVSRANVAPVN
RRWQVVVIEDADRVTERGADALLKALEEPAPKTVWLLCAPSADDVIVTIRSRCRELRLVT
PPVEEVAKLLVRRDGVDEVMAQYCARAAQGHVGRARALALNEEARKRRHEILSLPARLNT
LTDCLSAAESLVASASEEAGQLTADLDAREMTELQAALGMGTRRVKARGVQGAIKELEDQ
QKARAKRFQRDALDRVLTELTGYYRDVLACQTAPGVSFVNADIADEITAFAGRTRPEQTV
HALDALLEARKALEGNVAPQLAFEAMLLGLGRASHC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgggaaatgggtccctcgtcggtgggggatggcaggatgagcacgtgagcgtgtgggac
gaactcgtgggtcaggacagggccgttgagacgctgcggcgtgcggtggcgggcggcagg
cacgccatgacccacgcgtggttgttcgtcgggccgcccgggtcggggcgttccaatgcg
gcacgtgcgttcgcggctgctctccagtgccacgacggcggctgcggacgctgcaacgac
tgccgcacgtcgctgtccggcgcccaccccgacgtgaccctgctgcgcaccgaacagctc
agcatcggcgtcgacgagatgcgccagctggtttccagggccaatgtcgcgcccgtgaac
cgccgctggcaggtggtcgtgatcgaggacgcggaccgcgtcaccgaacgcggcgccgac
gcgctgctgaaggccctggaggaacccgcaccgaaaaccgtgtggttgctgtgcgcgccc
agcgccgacgacgtgatcgtcaccatccgttcccgctgccgggagctgcggctggtcacc
ccgccagtcgaggaagtggcgaaactgctggtccgccgcgacggtgtggacgaggtgatg
gcccagtactgcgcccgtgccgcccagggacacgtcggccgtgcccgggccctggctttg
aacgaggaggcccggaaacggcgccacgagatcctgtcgctgcccgcccggctcaacacc
ctcaccgactgcctgtcggcggccgaatccctcgtcgcctccgcatccgaggaggctggg
cagctcaccgcggacctcgacgcccgggagatgacggagctccaggcggcactgggcatg
ggcaccaggcgggtcaaggcgcgcggggtccagggagccatcaaggaactggaggaccag
cagaaggcccgggcgaaacgtttccaacgcgacgccctggaccgggtgctcaccgaactg
accggctactaccgcgacgtcctggcctgccagaccgcccccggtgtgtcgttcgtgaac
gccgacatcgccgacgagatcacggctttcgccggacgcacccgtcccgaacagacggtg
cacgccctcgacgccctgctggaggcccgtaaggccctcgagggcaatgtggcaccccag
ctggccttcgaggcgatgctgctggggctggggcgggcctcgcattgctga
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