KEGG   Pseudopropionibacterium propionicum: HMPREF9154_2752
Entry
HMPREF9154_2752   CDS       T02180                                 
Symbol
cas1_2
Name
(GenBank) CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
ppc  Pseudopropionibacterium propionicum
Brite
KEGG Orthology (KO) [BR:ppc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppc03400]
    HMPREF9154_2752 (cas1_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppc02048]
    HMPREF9154_2752 (cas1_2)
DNA repair and recombination proteins [BR:ppc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     HMPREF9154_2752 (cas1_2)
Prokaryotic defense system [BR:ppc02048]
 CRISPR-Cas system
  Universal Cas proteins
   HMPREF9154_2752 (cas1_2)
SSDB
Motif
Pfam: Cas_Cas1 Cas_Cas4 PDDEXK_1 Med9
Other DBs
NCBI-ProteinID: AFN46127
LinkDB
Position
complement(2966678..2968342)
AA seq 554 aa
MSTQGEYSAEPQLVPARMLNELVYCQRLFHLEWVDGRWAHNDDTIQGSVAHDATDRRSGR
MPAPDEEEKPFTSIQVALSDPDLGVTAVIDRVDHEDGSSSPVDMKKGSGPRDGGMWPADR
VQVLTQAVLLRRAGYSVNRADISYLGSHHRASIEVGQDAETEVRELVALARKVAAQELPP
PPLLNDPRCLRCSLAPLCMPDETNYLLERSGEQPRRIIVKNPDARPVYVNTQGASVKVSG
GRLLVAVKGETVAERRLLDVSQVCVVGNVQITTQALRALWRRGAVVIWLSYGGWLDGWSQ
GPMNGHVTLRRRQVLASVHGLRFAQQMIRGKIHNQRVLLRRNAKVSLDDSVLEQLKELEA
KTESAASLETLLGIEGTAARLYFGQFHKLLSPRLEVAAEFQAHGRARRPPPDPVNAVLGF
CYSLLTKDLIAVLTGVGLDPFLGVLHQPRYGRPALALDLAEEFRALVAESVALQCINNGE
INEKSFMRGHLGVALTADGRRSVIQAHERRLETELKHPLFGYQVSYRRVLDLQARVLAAS
FTGELDSYTPLMTR
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgtcgacgcagggggagtactcggcggaaccgcagctggttcccgcgaggatgctgaac
gaattggtgtactgccagcggctgttccacctcgaatgggtggacggccgctgggctcac
aacgacgacacgatccagggttcagtggcccacgacgcaacggatcgtcgttccgggcgg
atgcccgcgcccgatgaggaggagaaaccgttcacctcgattcaggttgcgttgtcggat
ccggacctcggggtgacggccgtcatagaccgggtggaccacgaggacggatcgtcgagt
cccgtggacatgaagaagggatccggtcccagggacggcggaatgtggcctgccgaccgg
gtgcaggtcctgacccaggcggtgctgctgcgacgcgccgggtattcggtgaaccgcgcc
gacatttcctatctgggatcgcatcacagggcctctatcgaggtggggcaggacgcggaa
acggaggtgcgggagctggtggcgttggcgcggaaggtggctgcgcaggaacttccgccc
ccgccgctgctgaacgacccgcgctgcctccgctgctcgctggcgccgctgtgcatgccc
gatgagacgaactatctgctcgaacgttccggcgagcagccgcgtcggatcatcgtcaag
aatcccgacgccagacccgtgtacgtgaacacgcagggggcgtcggtgaaggtatccggt
ggccgcctgctggtggcggtcaagggtgagacggtggccgagcgtcgactcctcgacgtc
tcccaggtgtgcgtggtgggaaacgtgcagatcaccacccaggcgctcagggctttgtgg
cgcaggggcgcggtggtgatttggctcagctacgggggctggctcgacggatggtcgcag
ggcccgatgaacggtcacgtgacgctcaggcgacggcaggtgctggcgagcgtccacggt
ctgcggttcgcgcagcagatgatccggggaaagatccacaaccagcgggtgctgctgcgc
cgcaacgcgaaggtgtcgctggatgattcggttctggagcagctcaaggaactggaagcg
aaaaccgaatccgctgcgtccttggagacgctgctcgggatcgagggcacggcggcgcga
ctgtactttgggcagttccacaagctgttgtctccccgactcgaggtcgcggccgagttc
caggcgcacggcagggcgcgacgtccaccacccgatcccgtcaacgcggtgctcgggttc
tgctacagcctgttgacgaaggacctcatcgcggtgctgaccggggtggggctggatccc
ttcctcggggtgctgcaccagccccgctacggcagacccgccctcgccctcgatctggcc
gaggagttccgcgccctcgtggcggaatccgtcgcattgcaatgcatcaacaacggcgaa
atcaacgagaaaagcttcatgcggggacatctcggggtggcactgaccgcggatgggcga
cgctccgtcatccaggcgcacgaacgccgcctcgaaacggagctgaaacacccgctgttc
ggctatcaggtgtcgtaccggagggtgctggatcttcaggcgcgggtgctggcggcttcc
ttcacgggagaactggattcctacaccccattgatgacgaggtga

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