Pelobacter propionicus: Ppro_0440
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Entry
Ppro_0440 CDS
T00436
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ppd
Pelobacter propionicus
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppd03019
]
Ppro_0440
Messenger RNA biogenesis [BR:
ppd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ppro_0440
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ABK98073
UniProt:
A1AL53
LinkDB
All DBs
Position
461283..462416
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AA seq
377 aa
AA seq
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MTRQYVADIKDRDPVKGVFLVKEKIMAMAKNGKPYMNLRFMDKSGEVDAKLWDNTDVLDK
LFDKNDFVRVRGKASVYMNKMQVVVAEISRVPDEEVNLADFLPESPRSIGEMRQELRDVV
GALDNSHLKGLMEAFLADEPLMDQYCKAPAAKGMHHVYLGGLLEHSLALVRLIRAIVPLY
EGINEDLLVVGALLHDVGKIQEMSYERAFDYTDAGKLLGHITIGVELVEDKIRQVDGFPR
ELSLLLKHMLLSHHGQYEFGSPKRPKTVEATILNYLDDMDSKINGIRTHIAKETASSSRW
TAHHRLYDRYFFKVNGLDGEEEPVCAREEGCQVVPLEELPPPAVQRPVPRREKQVFSNQP
LRKLENLNLFGNGSNEE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgacagtatgttgcggatataaaggaccgggatccggtcaagggagtctttctg
gtcaaggaaaagatcatggccatggccaagaacggcaaaccgtatatgaatctgcggttc
atggacaagagcggtgaggtggacgccaaactgtgggacaacacggacgttctggacaag
ctcttcgacaagaatgactttgtcagggtgcgtggcaaagcctcggtctatatgaacaaa
atgcaggtcgtggtggccgagatcagtagggtcccggatgaggaggtcaacctggccgac
ttcctgcccgaatcgccccgcagcatcggagagatgcgccaggaactgcgcgacgtggtc
ggcgctcttgacaattcccacctgaaggggctgatggaggcatttctggccgacgagccg
ctgatggatcagtactgcaaagccccggcagccaaggggatgcaccatgtctacctggga
gggttgctggagcattcactggcgctggtcaggctgatcagggccatcgtaccgttgtac
gaggggatcaacgaggacctgctggtggtgggtgccctgctgcacgatgttggcaagatc
caggagatgagttacgagcgtgccttcgactataccgatgccggcaagttgctggggcat
atcaccatcggcgtggaactggtggaagacaaaatccgtcaggtggatggttttccacgg
gaactgtcgctcttgctgaaacatatgctgctctcacatcatggccagtatgaattcggc
tcacccaagcgccccaagaccgttgaagccaccatcctgaactacctggatgatatggat
tccaagatcaacggaatccgcacccatatcgccaaggagaccgccagcagttcccgctgg
accgcccatcaccggctgtacgaccgctatttcttcaaggtgaacggtctggacggggag
gaggaacctgtctgcgcccgcgaggagggttgccaggtggtaccgctggaagagcttccc
ccgccggcggtgcagcggcccgttccccgcagggagaaacaggtgttcagcaaccagcct
ctgcgcaagttggaaaatttgaacttgttcggcaacgggtccaacgaagaatag
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