Pelobacter propionicus: Ppro_0754
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Entry
Ppro_0754 CDS
T00436
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ppro_0754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppd03019
]
Ppro_0754
Enzymes [BR:
ppd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ppro_0754
Messenger RNA biogenesis [BR:
ppd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ppro_0754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
AAA_22
UTP25_NTPase-like
UvrD-helicase
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ABK98384
UniProt:
A1AM14
LinkDB
All DBs
Position
complement(795747..797090)
Genome browser
AA seq
447 aa
AA seq
DB search
MDFQKFEFHPTIAAGISAAGYSTPTPIQKQSIPPVMAGSDVMGLAQTGTGKTAAFALPIL
HRLMEGKQGTVRALIIAPTRELAEQINTSIAQLGAKTGLKSMTVYGGVSVNPQIERLRRG
VDIVVACPGRLLDHINQGTIDLSRIEVLVLDEADQMFDMGFLPDIRRVLKHLPAQRQTLL
FSATMPDDIRRLASDILRQPITVQAGSTAPPVTVSHALYPVSQHLKTPLLLELLRHTDTE
SVLIFARTKHRAKRLGEQLEKAGYRATSLQGNLSQNRRQAALDGFRDGTFQIMVATDIAA
RGIDVSQISHVVNYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTPDDNAMVRTIEKKLNA
ELERRTVDQFDYSVPAPHKDSEFARPPRPPRGGGRQASGKPATRGNTAGSGAPRDNAAAA
GKPKTGKPGSAVPAQAVRRPQRSQRAH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatttccagaagttcgagtttcatcccaccatcgcggccggcatcagcgccgccggc
tacagcacccccacccccatccagaagcagtcaataccgccggtcatggccggcagcgac
gtcatgggcttggcccagaccggcaccggaaagacagcggcctttgcactgccgatcctg
catcgcctgatggagggaaaacagggcacagtcagggcgctgatcatcgcccccacccgg
gagctggccgaacagatcaacacatccatcgcccaactgggtgccaaaaccggcctgaag
agcatgaccgtctacggcggggtatccgtcaacccacagatcgaaaggctcaggcgcggc
gtcgacatagtcgtggcctgccccggccgcctgctggatcacatcaaccaggggacgatc
gatctgtcgcgaatcgaggtactggtactggatgaggccgaccagatgttcgacatgggc
tttctgcccgatatccgcagggttctcaagcatctccccgcccagcggcagacgctgctc
ttttccgccaccatgcccgacgacatccggcgcctggccagcgacatcctccgccagccc
ataacggtgcaggccggcagtacggcgccgccggtcacggtcagccacgccctctatccg
gtcagccagcacctgaagaccccgcttctgctggaacttctgcgccacaccgacacagag
tcggtactgatcttcgcccgcaccaagcatcgcgccaaacgcctgggggaacaactggag
aaagccggctaccgggccacttccctgcagggaaacctctcccagaaccggcgccaggcc
gccctggacggcttccgcgacgggaccttccagatcatggttgccaccgacatcgccgcc
cggggcatcgacgtatcccagatctcccacgtggtcaactacgatatcccggacacggcc
gaggcctatatccatcgcatcggccgcaccggacgcgcagcccgcagcggcgacgcattc
accttggtcactcccgatgacaacgccatggtgcgcaccatcgagaaaaaactcaatgcg
gagctggagcgcaggaccgtggatcagttcgattacagcgtcccggcgccccacaaggac
agcgaatttgcacgtcctccgcgccccccccggggaggaggcagacaggcgtccggaaaa
cctgcgacgcggggaaacacggcgggtagcggagcgccccgcgacaacgccgccgcagcg
ggcaaaccgaaaacagggaagccgggcagtgccgtgccggcccaggcggttcggcgcccc
cagcgttcacaacgggcacactga
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