Pelobacter propionicus: Ppro_0966
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Entry
Ppro_0966 CDS
T00436
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppd
Pelobacter propionicus
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppd03016
]
Ppro_0966
Enzymes [BR:
ppd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ppro_0966
Transfer RNA biogenesis [BR:
ppd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ppro_0966
Prokaryotic type
Ppro_0966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABK98594
UniProt:
A1AMM4
LinkDB
All DBs
Position
1009220..1010134
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AA seq
304 aa
AA seq
DB search
MISGFFVIDKPAGISSHDVVSRVRRILGTRRVGHTGTLDPFATGVLPVAVNDATKVIPFL
DEGVKCYQALLRLGVVTDTLDMTGRILAEGDYSSVSRERFLELLTRFCGVISQVPPMFSA
IKRDGQPLYKLARQGIEVERRARQVEIHSLELLSFEPPLACLRVSCSRGTYVRSLADDLG
AELGCGASLQELRRIASGPFHLSSAITLATLEQAKEGGMSDALCLDPYAALAHLPDIPLS
DAGLAKVRHGRSPEWGETLLSAPCEGTEAGLARLSRNGSLAAVARIEPLPYGGSRLVLKR
VFCN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgattagcggcttcttcgttatcgataaacctgccggcatcagctcccacgacgtggtc
agccgtgtgcgcagaatcctgggtacacgcagggtggggcacaccggtacgctcgaccct
tttgcaaccggtgttctgccggtggcggtcaatgacgccaccaaggtgatcccttttctg
gacgagggggtcaaatgctaccaggccctgctgcgcctgggcgtggtgaccgataccctg
gacatgaccggcaggattcttgccgagggagattactcctccgtcagccgggagcgcttc
cttgagctgttgacccgcttctgtggggtgattagccaggttccccccatgttctcggca
atcaagcgtgacggtcagccgctgtacaagctggccagacagggcatcgaggtggagcgc
cgggcgcgacaggtggagattcactcccttgagcttttgtcgtttgagccgcctctggca
tgcctgcgggtcagctgctcccgcggcacctatgtgcgtagcttggcggatgaccttgga
gcggagttggggtgcggagcgtccttgcaggaactgcgcagaattgccagcggaccgttc
catctctccagcgccattacgcttgcgacgcttgagcaggccaaggagggagggatgtcg
gatgcgctctgtctggatccctatgcggcccttgcgcatctgcccgacattcccctgtcc
gatgccggactggccaaggtcaggcatggcaggtcgccggaatggggggagacgctgctt
tccgctccctgcgaggggactgaggcagggctggctcggctctcacgtaacgggagtctg
gccgccgttgcccggatcgaaccgctgccttatggtggttcccggctggttctcaagcgg
gtattctgcaattag
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integrated database retrieval system
