Pelobacter propionicus: Ppro_1890
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Entry
Ppro_1890 CDS
T00436
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
ppd
Pelobacter propionicus
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppd03032
]
Ppro_1890
03036 Chromosome and associated proteins [BR:
ppd03036
]
Ppro_1890
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_1890
DNA replication proteins [BR:
ppd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ppro_1890
Chromosome and associated proteins [BR:
ppd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Ppro_1890
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Ppro_1890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABK99500
UniProt:
A1AQ80
LinkDB
All DBs
Position
complement(2040438..2040710)
Genome browser
AA seq
90 aa
AA seq
DB search
MTRSELVEQLSVRKDISIGTAEKIVQEIFGSMTDTLIAGDRIEIRGFGSFENRDYDERTG
RNPKSGIEVSVAAKKRPFFKVGKDLKERIL
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggtcagaattggtagaacaactgtcagtaaggaaagacatctcaattggtact
gcggagaaaattgttcaggaaatctttggtagtatgactgacaccctgattgccggtgac
cgtatcgaaatacgcggtttcggcagtttcgaaaaccgggactatgacgagcgtactggt
aggaatcccaagtcgggtatcgaggtatctgttgccgccaagaaacgccctttcttcaag
gtaggtaaggatttgaaggaacgcatactgtaa
DBGET
integrated database retrieval system
