Pelobacter propionicus: Ppro_2149
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Entry
Ppro_2149 CDS
T00436
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ppro_2149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_2149
Enzymes [BR:
ppd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Ppro_2149
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ppro_2149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
Biotin_carb_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABK99757
UniProt:
A1AQY7
LinkDB
All DBs
Position
2308260..2311871
Genome browser
AA seq
1203 aa
AA seq
DB search
MRELEHLGIELSGRNLIEASAGTGKTYAIACLYLRLVIESDLTPEQILVVTYTEAATEEL
RGRIRSRIRQALDTFSGTVSKDPFLLGLVQKVNKEGPGEDIARNRLDRALKSFDLASIFT
IHGFCLRALQDNAFESGSLYDTELITDQADLLQEVVDDFWRRTFFSEPAPLLGYALRTKL
SPAYSSTFLKGMLGNPKLEILPNFDLGSIPSLQEECETLFSLVKEIWLNSHTEIRELIRS
DKGLSRAKGAYNPDTLPPLFEAMDAYARSDNPFDLFSDFSKLCTIGILKGKKPTGAPLSH
PFFDLCEQLRQRVGQRFLALKAELLAFAAEHVAARKSERNIRFFDDLLTSLYEALGGPRG
DDFALCLRQKYRAALIDEFQDTDPVQFDIFRKIYADPAHPLFLIGDPKQAIYSFRGADIF
AYLKAAAGVEATRRFTLTSNWRSAPALLAAFNALFDNDFKPFLFGEIAYHSVASGLEEEG
NRLTWAEADDAPLQLWCVPPDEEGKASNVGRANKSVPMAVAAEIARLLRAGMAGEALIDG
RPVLPEHIAVIVRSHRQAGYIQEALKNLSIPSVMRSDASIFTTREARQVCTLLAALAAPG
NEWKLRAALVTDIFGLTGDDIATLLEEEPLWEEWLSKFQEYHQIWLERGFMVMVQTLLSR
EGVRGRLLRKPDGERRLTNLLHCCEILHAASQERSLGPEGLAVWFGERISAGDASEGYQI
RLETDEKAVKILTIHVSKGLEYPIVFCPFLWAGVRSDEEVVTFHDDFRLVKDYGSADQEL
HRVLAQKESLAENLRLLYVALTRAKFRCYLVTGKIVDSTGRNRPETSPLAYLFHASATTR
NADDTVGQLGQEVKKLSAEEMEQQLRAVAARQQDAISVSSMPEAGGAERYEPFHDGGERL
SEKKFNAMIERDWRVSSFTSLASHDLSTTELPDRDEAGAKETALPPLPEADPREKSIFTF
PKGAHAGIFLHEIFEKLDFSGSSGEKTTDLVAACLKKHCFGAEWQSTISDMIENVVSTQF
SAPEGPFSLSDLRQGKWLAELEFFFPLKFVTSNILKECLGSWSSGCTAVNLQALAQSLRF
RPAKGMVRGFMDMVFEHGGRFYLVDWKSNHLGYRVEAYGEKALTSAMDQNLYSLQYLLYT
VALNRYLSLRIKEYRYETHFGGVLYLFLRGMDRERGEAFGVFRDTPPAGLIHEVTNCLIQ
AGG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagagaactggaacatctgggcatcgagctctccgggagaaacctgatcgaggccagc
gccggcactggcaagacctatgccatcgcctgcctctatcttcgccttgtcatcgaatcc
gacctgactcccgagcaaatcctggtggtgacctacaccgaggcggccaccgaggagctg
cgcggccgcatccgcagccgtatccgccaggccctggatacctttagcggcaccgtttcc
aaggacccctttctcctggggctcgtccagaaggtgaacaaggaaggccccggcgaggat
attgcgcgaaaccgcctcgaccgggcgctcaaatccttcgatctggcctccattttcacc
attcacggattctgcctgagggcgcttcaggacaatgccttcgaaagcggctctctgtac
gacaccgaacttatcaccgaccaggccgacctgcttcaggaggtcgtggacgatttctgg
cgtcggaccttcttttcagagccagcccccctgctcggctacgcgctgcgcaccaagctc
tctcccgcctattccagcacctttctcaagggaatgctgggcaatcccaagctggagatc
ctgcccaatttcgacctcggcagcatccctagcctccaggaagagtgcgagactctcttt
tccttggtcaaggagatatggctgaattcgcacaccgagatcagggaactcatccggagc
gacaaggggctttcccgggcaaagggggcgtataacccggacaccctccccccccttttc
gaggccatggatgcttatgcgcgttcagacaacccctttgacctgtttagcgacttcagc
aagctctgcaccatcggcattctgaaggggaaaaagccgaccggagctcccctcagccac
cccttcttcgatctctgcgagcagctgcggcaaagggtcggccagcgattcctggcgctc
aaggcggagcttttggccttcgcggccgagcatgtagcggcccgaaaaagtgagcgcaac
atacgcttcttcgatgaccttttgacctccctgtacgaagcccttggtgggccacgcggc
gacgatttcgccctctgcctcaggcagaaataccgggccgcactcatcgacgagtttcag
gacaccgacccggtacagttcgacattttccggaagatctatgccgatcccgcccaccct
cttttcttgatcggcgaccccaaacaggccatctacagcttccggggcgccgacatcttc
gcctacctcaaggccgccgccggggtggaagcgaccaggcgctttaccctgaccagcaac
tggcgctccgcgccggctctcctggccgccttcaatgcgctctttgacaatgatttcaag
ccattccttttcggggagatcgcctaccattcggttgcatccggccttgaggaagaaggc
aaccgcttgacctgggccgaagctgacgacgccccacttcagctctggtgcgtgccgccg
gacgaagagggaaaggccagcaacgtgggccgggcgaacaagagcgtaccgatggcggtt
gccgcggaaatcgcccgcctgctgcgggccggcatggcgggagaggccctcattgacggg
cgccccgtgcttccggagcatatcgcggtcatcgtccggagccatcggcaggccggctac
attcaggaggccctcaaaaatctttccatacccagcgtgatgcgcagcgatgccagcatc
ttcaccacccgcgaggctcgccaggtctgcacgctccttgccgcccttgccgcccccggc
aacgaatggaagctacgcgccgccctggtcaccgatattttcggccttacgggagacgac
atcgccaccctgctggaagaagagccgctctgggaagagtggctgtcgaagttccaggag
taccaccagatctggctggaacgggggttcatggtgatggttcaaaccctcttgtcgcgg
gaaggcgtacggggacggttgcttcgcaagcccgacggggagcgcaggctcaccaacctg
ctgcactgctgcgagatcctgcatgcagcttcccaggagaggagcctgggacctgagggg
ctggcggtctggtttggcgagcggatcagcgccggggatgcctctgaagggtaccagatc
cggcttgagacggacgagaaggcggtaaagattctgaccattcatgtcagcaaggggctg
gagtatcccatcgtgttctgccccttcctctgggctggggtacggagcgatgaagaggtc
gtcaccttccatgacgatttccgactcgtgaaggactacggctctgccgatcaggagctg
cacagggtcctggcccagaaggaatcgctggcggaaaacctgcggctgctctatgtggcc
ctgacgcgggcaaagttcagatgttacctggttacagggaaaattgtcgacagcaccggc
agaaacagaccggaaacgtcccccctggcctacctgttccacgcctctgcaacgacacgc
aacgccgatgacacggttgggcagctgggccaggaggtaaaaaaactgtccgccgaagag
atggaacagcaattacgagcagtggccgcgcgacagcaggacgccatatcggtctcttcc
atgccggaggctgggggcgccgagcgctacgagccgttccacgatggcggagaacggctt
tccgaaaagaagtttaacgccatgatcgagcgcgactggcgggtatccagcttcacctcg
ctcgcatcccacgatctttcgacgacggaactaccggaccgggacgaggccggggccaaa
gagacggcgctgccccccctacccgaagccgacccccgggaaaagagcatcttcaccttt
cccaagggggcacatgccgggatcttcctgcacgagatattcgagaagctcgactttagc
gggagttccggtgaaaaaaccacggatctggtggctgcctgcctcaagaagcattgcttc
ggagctgagtggcaatccaccatcagcgatatgatcgagaatgtcgtatcaacccagttt
tccgcgccggaaggccccttctccctttccgatctcaggcaggggaaatggcttgccgag
ctggaattcttcttcccgctcaaattcgtcacctcgaacatcctgaaagagtgcctgggc
tcatggagctccggctgtaccgcggttaacctgcaagcgctggcgcagtcgctgaggttt
cgccccgccaaggggatggtaaggggcttcatggatatggtctttgagcatgggggcaga
ttctacctcgttgactggaaatccaatcaccttgggtaccgggtcgaggcctatggcgaa
aaggcgcttacgtcggccatggatcagaatctctactctctccagtacctgctgtacacg
gtcgccctcaacagatatctgtcgcttcggatcaaggagtaccggtacgaaacccatttc
ggcggcgttctatacctctttctccgcggcatggacagggagaggggcgaagcgttcggc
gtgttccgggatactccgccagcgggattgatacatgaagtgaccaattgcctgatccag
gctggagggtaa
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