Pelobacter propionicus: Ppro_2535
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Entry
Ppro_2535 CDS
T00436
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ppro_2535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppd03019
]
Ppro_2535
Enzymes [BR:
ppd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ppro_2535
Messenger RNA biogenesis [BR:
ppd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ppro_2535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABL00140
UniProt:
A1AS19
LinkDB
All DBs
Position
complement(2746730..2748040)
Genome browser
AA seq
436 aa
AA seq
DB search
MSFETLGLRAELLSAIAAQGYTNPTPIQTGAIPAIFEGCDLLAGAQTGTGKTAAFALPIV
QMLGENIPPDKRRRPRALVLVPTRELAAQVSEQMNNYARRLSLRSTMIYGGVNIQAQIER
LHRGVDIVVATPGRLLDHAERGTVNLSRIKFLVLDEADRMLDLGFIDAIHKVAQYLPVKR
QTLLFSATYSQSIKQLADELLNQPRRIEVARRNIAADAVTQAVYQIERSRKREMLSFLIR
TGRWNQVLVFARTRYGADKLTEELLLDGIKASAIHSNKSQSLRTRTLAEFKRGEFRVLVA
TDVAARGLDIERLPHVVNYDLPQVPEDYVHRIGRTGRAGEDGVALSLVSREEQPLLQAIE
KLLKYAIPRQTLAEFPQYAAKRSIEVKESKQAKEKSKARKTREKLTQAPEKTRTSRRKKV
VEERPAPKTGRRGARS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaaactcttggcctgcgcgccgagctgctgagcgcgattgccgcccagggc
tataccaatccgacccccatccagaccggggcgatcccggcgattttcgagggctgcgac
ctgctggccggtgcccagaccggcaccggcaagactgcggcgtttgccctgccgatcgtg
cagatgctgggtgaaaatattcccccggacaaacgccgccggccgcgcgcgttggtcctg
gttccgacccgcgagctggcggcccaggtcagcgagcagatgaacaattacgcccgccgc
ctgtcgctgcgctccacgatgatctacggcggggtgaacatccaggcgcagatcgaacgg
ctgcaccgcggcgtggatatcgtggtcgccacgccggggcggctgctcgatcacgcggaa
cggggcaccgtgaacctttcccggatcaagtttctggtgctggacgaggccgatcgcatg
cttgatctgggatttatcgacgctatccacaaggtggcgcagtatctgccggtcaagcgc
cagactctgctcttttcggcaacctattcccagagcatcaagcagctggccgacgagctg
ctcaatcagccgcggcggatcgaagtggcgcgccgcaatatcgccgccgacgcggttacc
caggcggtctatcagatcgaacgtagccgcaaacgggaaatgctctcgttcctgatccgc
acggggagatggaatcaggtgctggtcttcgcccgcacccgttacggcgcggacaagctg
actgaagaattgctccttgacgggatcaaggcttccgccattcacagcaacaagagccag
tcgctccggacgcgtaccctggcggagttcaagcggggtgagtttcgcgtgctggtggcg
accgatgtggcggcgcgcgggctcgacatcgagcgcctgccgcatgtggtgaattacgat
ctgccccaggttcccgaagactatgtgcatcggatcggtcgcaccggccgggccggagag
gacggggtggctctctcgctggtcagccgggaagagcagccgctgctgcaggcgattgag
aaactgctcaagtatgccatcccgcgtcagaccctggcggagttcccgcagtatgcggcc
aaacggagtatcgaggtaaaggaaagcaagcaggccaaggaaaagtccaaggctaggaag
acacgggaaaagctgacgcaggctccggaaaagaccaggacttcccgacgaaaaaaagtc
gtggaagagaggcccgcccccaaaaccggtcgccggggggccaggtcgtaa
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