Pelobacter propionicus: Ppro_3312
Help
Entry
Ppro_3312 CDS
T00436
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ppro_3312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppd03019
]
Ppro_3312
Messenger RNA biogenesis [BR:
ppd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ppro_3312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KhpA-B_KH
KH_2
DUF4011
Motif
Other DBs
NCBI-ProteinID:
ABL00905
UniProt:
A1AU84
LinkDB
All DBs
Position
complement(3650161..3651726)
Genome browser
AA seq
521 aa
AA seq
DB search
MQVSIWMLVITVLAAVAAYFAGSRVNKKDSGLIVKQSEELAAKMIDDARREAETITKEAD
LKARAEIIEAKAGHDREITEKKKDLQILEKRLQQKEENLDKKFGLIEQKELDMLKKEQSF
VAREQNLAAKSEELSRASDVQQAKLEEISGMSASEAKKELMTSMEDEAKHDAAKRIKAIE
EEARETADKKAKEIISLAVQRYAGEYVAEKTVSVVPLPSDEMKGRIIGREGRNIRALEAA
TGIDLIIDDTPEAVILSGFNPVRREVARMSLEKLIGDGRIHPGRIEEVVAKATEEVDLGI
KEAGERAAFDLGVHGIHPEIIKLIGRLKYRTSYTQNIYQHSLEVAFICGIMAAELGINVK
QAKRAGLLHDLGKAVDHEVEGSHAVIGADLARKYGESAKIVHAIMAHHEDEKPNSVLAVL
VQAADALSGARPGARREMMETYVKRLDDLERIATSFGGVTNSFAIQAGREIRVMVSSDHV
TDEQSLIMARDIAKKIEAEMTYPGQIKVNVIRETRAVEYAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaagcatatggatgctggtcatcaccgtgctggcggccgtcgcggcctacttc
gcgggaagcagggtcaacaagaaggattcgggcctgatcgtcaaacagtccgaggaactg
gcagccaagatgatcgacgacgcccggcgcgaggcggaaaccatcaccaaggaagctgac
ttgaaggccagggccgagatcatcgaggccaaggccggccatgaccgggagataacggag
aagaagaaagacctgcagatcctggaaaaacggttgcagcagaaggaagagaacctggac
aagaagttcggcctgatcgagcagaaggaactggacatgctcaagaaggagcagtccttt
gtcgccagggagcagaacctcgcggcaaaaagcgaggaactgagcagggcctccgacgtg
cagcaggccaagctggaggaaatctccggcatgtcggccagcgaggctaagaaagaattg
atgaccagcatggaggacgaggccaagcacgatgcggccaagcgcatcaaggccatcgag
gaggaagcccgcgaaacagccgacaagaaggccaaggagatcatatccctggcggtccag
cgctatgccggcgaatacgtggccgagaaaaccgtgtcggtcgtgccgctcccctcggac
gagatgaaggggcgcatcatcggccgcgagggacgcaacatccgcgccctggaggctgct
accggcattgacctgatcatcgacgatacccccgaggcggtgatcctctccggattcaac
ccggtacggcgcgaggtggcccgcatgtccctggaaaaactgatcggcgacggccgcatc
catcccgggcgcatcgaagaggtggtggccaaggccacggaagaggtggacctgggcatc
aaggaggctggagagcgggccgccttcgacctgggagtgcacggcattcatccggagatc
atcaagctgatcggccgtctcaagtaccgcacctcctatacccagaacatctaccagcac
tcgctggaagttgcctttatctgcggcatcatggccgccgagctgggcatcaacgtcaaa
caggccaagcgcgccggtctgctgcacgacctgggcaaggccgttgaccatgaggtggag
ggctcccacgccgtgatcggagcggacctggcccgcaagtacggcgagtcagccaagatc
gtgcacgccatcatggcccaccacgaggatgaaaaacccaacagcgtactggccgtgctg
gttcaggccgccgatgccctctccggggcacgtcccggcgcacggcgggagatgatggag
acctacgtcaagcggctggatgacctggagcgcatagccacctcctttggcggcgtcacc
aattccttcgccatccaggccggccgcgagatccgcgtaatggtctccagcgaccatgtc
accgacgagcagtcactgatcatggcccgtgacatcgccaagaaaatcgaagcggagatg
acctatcccggccagatcaaggtcaacgtcattcgggaaacgcgggcagtggaatatgcc
cgttaa
DBGET
integrated database retrieval system
