Pelobacter propionicus: Ppro_3608
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Entry
Ppro_3608 CDS
T00436
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ppro_3608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_3608
Enzymes [BR:
ppd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Ppro_3608
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Ppro_3608
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ppro_3608
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Zn_ribbon_TFIIB
DUF7351
Ribosomal_S13
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
ABL01200
UniProt:
A1AV29
LinkDB
All DBs
Position
complement(3990116..3990919)
Genome browser
AA seq
267 aa
AA seq
DB search
MPELPEVELTRRRLERDITGKQVQQVLVRAPKLRLPVPPELEEALKGRTVRAVERRGKYL
LLECEAGWLIVHLGMTGFLRLLHTPQLPGKHDHVDIVFTDGSVLRFHDPRKFGTIAWTTD
SLDKHPLLAGIGPEPLTAAFSGAYLFRVSRTRRVVVKLLIMNMAIVAGVGNIYANEALFR
AGIRPDRAASSLSRTECERLAVTIREVLQESIDLGSTYRVEEGTVTYHPLAFDVYGRGHG
TCTSCGGALEAVRLGNRSTVFCPRCQQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaacttcccgaggtggaactgaccagacgcaggctggagcgggacataacagga
aaacaggtccagcaggtgctggtccgggctcccaagctccgcttaccggtcccgccggag
ctggaggaagccctgaaggggcgaacggtccgggccgtggagcggcggggaaagtatctg
ctgttggaatgtgaagccggatggctcatcgtccacctggggatgaccggatttctccgg
ctgctccatacccctcagcttcccggaaagcacgatcatgtggacatcgtctttaccgat
ggttcggtgctgcggttccacgacccgcgcaagttcggcaccattgcctggacaacggat
agcctcgacaaacacccgctcctggccggaatcggccccgagccgctgaccgcggcattc
agtggcgcctacctcttcagggtgagccggacccgccgggtggtggtcaagctgttgatc
atgaacatggcaatagtcgccggggtcggcaacatctacgccaacgaggcgctgtttcgc
gccggaatccgccccgaccgggccgcgtcctccctcagccgtaccgaatgcgagcggctg
gccgtcaccattcgggaggtgttgcaggagtccatcgatctgggaagcacctatcgggtg
gaggagggcaccgtcacctatcacccccttgcgttcgacgtgtacgggaggggacatggc
acctgcaccagctgcggcggtgcgctggaagccgtccggctcggcaaccggagcacggtg
ttctgtccccgctgtcagcagtga
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integrated database retrieval system
