Pelobacter propionicus: Ppro_3807
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Entry
Ppro_3807 CDS
T00436
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppd
Pelobacter propionicus
Pathway
ppd03030
DNA replication
ppd03430
Mismatch repair
ppd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ppro_3807
03430 Mismatch repair
Ppro_3807
03440 Homologous recombination
Ppro_3807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppd03032
]
Ppro_3807
03400 DNA repair and recombination proteins [BR:
ppd03400
]
Ppro_3807
Enzymes [BR:
ppd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ppro_3807
DNA replication proteins [BR:
ppd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ppro_3807
DNA repair and recombination proteins [BR:
ppd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ppro_3807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABL01395
UniProt:
A0R7K3
LinkDB
All DBs
Position
pPRO1:complement(185596..186510)
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AA seq
304 aa
AA seq
DB search
MNVPKHEMDALKLLEASQKYRILRRLDIMQHPGLTGKPITGKTRRVGLCIDTETTGFNFS
DDVIIELGIVAFEYDAMTGEISRIVDTYSGFEDPCRPLDPEVTAVTGITDDMLAGQSLDD
AAVGKIVSQASLCFCHNCKFDRSFLERRFPEFEKLPFACTMSQIDWKNELVTSRTLEYLL
YKCGACFIDAHRALNDAEGLLGLLLENLPVSKLSVFKTVLENARKPSFKIMAYNSAYSAK
DSLRDRKYHWEPGGDGKIKTWWTVVSEKDLDNEITFLNNIAYTNGTDDVEIIKIDAFNRF
SRRE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcccgaaacatgaaatggatgcattgaaactgctcgaagcatcacagaaatat
cgtatccttcgacgcctggacatcatgcagcaccctggtctcacgggaaaaccaatcacc
gggaagacgaggcgggtaggcctgtgtatcgatacagagacaacaggcttcaacttctct
gatgatgtgattatcgagcttggcattgtggcgttcgagtatgacgccatgacaggggaa
atcagcaggatcgtggacacatattcgggtttcgaagatccgtgccgtcccctggacccg
gaagtgacggcagttacgggtatcactgacgacatgcttgccggccagtcgctagatgat
gcggctgttggaaagattgtaagtcaagcaagtctatgtttttgtcacaactgcaaattt
gaccgttcctttttggagagaaggtttcctgagtttgagaagctcccttttgcatgcact
atgtcgcagatagactggaaaaatgagctcgttacatctcggactttagagtatttgtta
tacaaatgtggagcgtgtttcattgatgcacatcgtgcgctcaatgatgcagaaggactg
ttaggattgctcctagagaatttaccagtttctaagttatctgtatttaaaacagttttg
gaaaatgccagaaaaccaagctttaagatcatggcctacaactcagcatattcggcaaaa
gattcgctgagggatagaaaataccactgggagcctggaggtgatggaaagataaaaact
tggtggacagttgtttctgaaaaagaccttgataacgagattacgtttcttaacaatatc
gcctataccaatggaacagatgatgttgagataataaaaattgatgcgttcaatagattt
tcacgaagagagtag
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