Pediococcus pentosaceus ATCC 25745: PEPE_0006
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Entry
PEPE_0006 CDS
T00409
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppe03032
]
PEPE_0006
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_0006
Enzymes [BR:
ppe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PEPE_0006
DNA replication proteins [BR:
ppe03032
]
Prokaryotic type
DNA Topoisomerases
PEPE_0006
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PEPE_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABJ67117
UniProt:
Q03I55
LinkDB
All DBs
Position
6279..8810
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AA seq
843 aa
AA seq
DB search
MSEELSGRITDVNLSSQMRTSFLDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTP
EKPYKKSARIVGDVMGKYHPHGDSAIYESMVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTEARMSKITLEMLRDINKNTVDFQENYDGTEREPSILPARFPNLLVNGATGIAVGMT
TNIPPHNLSEVISAIHILMNNEDATTADLMEAVPGPDFPTGGIVMGKSGIRKAYETGHGT
IILRAKVDIETEKNGRERIVATELPYMVNKAKLIERIAELARDKRIEGITDVNDESDRDG
LRVVIDVRRDVSASVVLNNLYKMTLMQTTFGFNMLAIVNGAPKVLGLKEILQHYLVHQEE
VIRRRTEFDLKKAEARAHILEGLRIALDHIDEIIAIIRNSQTAEVAKDKLMNNYSLSSKQ
AQAILDMRLVRLTGLEREKVEDEYNKVMAAITDYRDILAHRERINEIIYKELLEIQERFG
DERRTELMVGEVLSLEDEDLIEEEDVMVTLTHNGYIKRMATSEFKTQNRGGRGIQGMGVH
DDDFIEHLVSTSTHDVLLFFTNAGKVYRMKGYEIPEYSRTAKGIPVINLLGISSGENIQA
VINIGRDNGDEDNENRYLFFTTLNGVTKRTPVAEFLNIRSNGLKAISLKENDEVINVVIT
DGEQNIIIGTHNGYAVSFKEADVRSMGRSATGVRGIRLRDEDYVVGSAILKPESKVLVIT
EKGYGKQTPASEYPIKGRGGKGIKTANITEKNGPLAGLVTVEGTEDVMLITDRGVMIRFD
VNNVSTTGRATLGVHVIKTDENSKVATMAIVDEAPVDDENQTQTPATEAAETESVTVEES
SEE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaagaattgtcaggacgaattacagatgtcaatttaagtagtcaaatgcgtaca
tcattcttggattatgccatgagtgttattgttgcgcgtgctttacctgacgttcgggat
ggactaaaacccgtccatcgtcgtattttatacgggatgaatgagttaggagttacacct
gaaaagccatataagaagtcagctagaatcgttggggatgttatgggtaagtatcatcct
catggtgactctgcaatttatgaatcaatggtccggatggcccaagactttagttaccgt
tacatgcttgttgatggacatggtaactttggatctgtcgatggggatggcgctgctgct
atgcgttataccgaagctcgaatgagtaaaattacattggaaatgctacgtgatatcaat
aaaaataccgtggatttccaagaaaactatgatggaacggaacgcgaaccatcaatttta
ccagcacgtttcccaaacttattagttaacggagcaactgggattgccgtggggatgacg
acgaatattccaccacataatttgtcagaagtcatcagcgctatccatattttgatgaat
aacgaagatgcaacaaccgccgacttgatggaagctgtccctgggccagacttcccaacc
ggtggaattgtgatgggtaaatcgggaatccgtaaggcatatgagactggacacggtacg
attattttacgggcgaaagttgatattgagactgaaaaaaatggtcgcgaacgcattgtg
gctacagaattaccatacatggtcaataaggctaaattgatcgaacgcattgctgaatta
gctcgtgataaacgaattgaaggaattactgatgtaaatgatgaatccgatcgtgatgga
cttcgagttgtcattgatgttcgtcgtgatgtcagtgcatctgtagttttgaataatctt
tacaagatgacattaatgcaaacgacctttggatttaatatgttggccatcgttaatggt
gctcctaaagtattaggcctaaaggaaattttgcaacactatcttgttcatcaagaagaa
gttattcgtcgacggactgaatttgatttgaagaaggctgaagcaagggcgcacatctta
gaaggtttgcggattgctttggaccacatcgatgaaattattgcgattattcgtaattca
caaacggctgaggttgctaaagataaattgatgaataactattcattatcaagtaagcaa
gctcaagcaatcttggatatgcgtttggtgcgtttgacaggactagaacgtgaaaaggtt
gaagacgagtacaacaaggtcatggcagcaattacggattaccgtgatattttagctcac
cgtgaacgaattaacgaaatcatttacaaagagttacttgaaattcaagagcgctttggg
gatgaacgtcggacagaattgatggtcggtgaagttcttagccttgaagatgaagactta
atcgaagaagaagatgtcatggttactttaacccataatggttacattaagcgaatggct
acgtctgaatttaagacgcaaaatcgcggtggtcgaggaatccaagggatgggtgttcat
gatgacgactttatcgaacatctggtttcaacttcaacccatgatgtactcttattcttc
accaatgccggtaaggtttaccggatgaaaggttacgaaatccctgaatatagccgaacc
gctaagggaattccagtaattaacttgcttggaattagtagcggagaaaatattcaggct
gtaatcaatattggacgtgataacggtgatgaagataatgaaaatcgttacctcttcttt
acaacgttaaacggtgtgacaaaacgaacaccggttgctgaattcctaaatatccgcagc
aatgggcttaaggccattagcttgaaggaaaatgatgaagtaattaacgtggttattacc
gatggcgagcaaaacattattatcggaacgcataacggatacgcggtaagctttaaagaa
gcagatgtgcgttcaatgggacgttctgctactggggttcgcggaattcgtttacgagat
gaagattatgtcgtcggttcagcaatcttgaaacctgaaagcaaggtcttggttattact
gaaaagggttatggaaaacaaactccggctagtgaatacccaattaaaggccgcggcggt
aaagggattaagactgcgaatatcaccgaaaagaatggtccattagctggattagtaacg
gtagaaggaacggaagatgttatgttgattacggatcgtggggttatgattcgtttcgac
gttaataatgtttcaactacaggtcgggcgaccttaggggttcacgtaatcaagacggat
gaaaattctaaagttgctacaatggcaattgttgatgaagcaccagttgatgatgaaaac
cagactcaaactccagcaactgaagcagcagaaactgaaagtgtaactgttgaagaaagt
tctgaagaataa
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