Pediococcus pentosaceus ATCC 25745: PEPE_0421
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Entry
PEPE_0421 CDS
T00409
Name
(GenBank) Chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PEPE_0421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppe03019
]
PEPE_0421
03110 Chaperones and folding catalysts [BR:
ppe03110
]
PEPE_0421
03029 Mitochondrial biogenesis [BR:
ppe03029
]
PEPE_0421
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppe04147
]
PEPE_0421
Enzymes [BR:
ppe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PEPE_0421
Messenger RNA biogenesis [BR:
ppe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PEPE_0421
Chaperones and folding catalysts [BR:
ppe03110
]
Heat shock proteins
HSP60 / Chaperonin
PEPE_0421
Mitochondrial biogenesis [BR:
ppe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PEPE_0421
Exosome [BR:
ppe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PEPE_0421
Exosomal proteins of other body fluids (saliva and urine)
PEPE_0421
Exosomal proteins of breast cancer cells
PEPE_0421
Exosomal proteins of colorectal cancer cells
PEPE_0421
Exosomal proteins of bladder cancer cells
PEPE_0421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABJ67517
UniProt:
Q03H05
LinkDB
All DBs
Position
469788..471407
Genome browser
AA seq
539 aa
AA seq
DB search
MAKEIKFSEDARTKMLKGVDKLADTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKAIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIE
KATSKAVEALHKMSHEVKTKDDIAQIASISSANPEVGKLIANAMEKVGNDGVITIEESRG
VDTTLDVVEGMQFDRGYMSQYMVTDNDKMEANLDNPYILITDKKIGNIQDILPVLQSVVE
QSRSLLIIADDITGEALPTLVLNKMRGTFNVVAVKAPGFGDRRKEQLEDIAILTGGTVIT
DDLGLNLKDVTIEQLGQSNKVTVTKDDTTIVEGAGSQEQIAERVGIIKQQISETTSDFDK
EKLQERLAKLSGGVAVIRVGAATETELKEKKYRIEDALNATRAAVEEGFVPGGGTALANV
ISDLEDVEAEGDEATGVNIVRRALEEPVRQIAENAGEEGSVIVTKLKGQKPGVGYNAAND
EWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADLPEDNPAPAAPAPGMGGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaattttcagaagatgcacgtacaaaaatgcttaagggtgtagat
aagttagctgacaccgttaagtcaacaattggacctaaaggccgtaatgtggtcttggaa
caatcatacggttcacctacaattactaatgatggtgtgacaattgctaaggcaatcgaa
cttgaagatcattttgaaaatatgggtgctaagttagtttcagaagttgcttcaaagacc
aacgacattgctggtgatggtacaactaccgctacggttcttactcaagcaatcgtcaat
gaaggaatgaagaacgttactgctggtgctaaccctgttggtatccgtcgcggtattgaa
aaagcaacaagtaaagcagttgaagctctccacaagatgtcacatgaagtaaaaactaaa
gatgatattgctcaaatcgcttcaatttcttctgctaacccagaagttggcaagttgatt
gctaacgctatggaaaaagttggtaacgatggtgttatcaccattgaagaatctcgtgga
gttgacacaacattggatgttgtggaaggtatgcaatttgaccgtggatacatgtcacaa
tacatggtaactgacaacgacaagatggaagctaaccttgataatccatacatcttaatc
actgataagaagatcggtaatatccaagatattcttccagttcttcaatcagtagttgaa
caaagccgttcattattgattattgcggatgacattacaggtgaagctctaccaacactt
gttttgaataagatgcgtggaaccttcaacgtagttgcagttaaggctcctggctttggt
gatcgtcgtaaggaacaattggaagacattgctatcctaactggtggtactgtaattaca
gatgaccttggtttgaacttgaaggacgttactatcgaacaacttggtcaatctaacaag
gttacagttactaaagatgatacaaccatcgttgaaggtgctggaagccaagaacaaatc
gctgaacgtgttggaattatcaaacaacaaatcagtgaaacaacttctgacttcgacaag
gaaaaacttcaagaacgtcttgctaagttatctggtggtgttgcagtaatccgtgttggt
gctgctactgaaacagaacttaaagaaaagaaataccgtatcgaagatgctttaaacgct
actagagctgccgttgaagaaggttttgttcctggtggtggtacagcacttgctaacgtt
atttcagaccttgaagacgtcgaagctgaaggcgatgaagctacaggtgttaacattgta
cgtcgtgcgcttgaagaaccagttcgtcaaattgctgaaaatgccggcgaagaaggttca
gtaatcgttacaaaacttaagggccaaaagccaggtgttggatacaacgccgctaacgac
gaatgggtcgacatggttgaagccggaatcgttgatcctacaaaggttacacgttcagca
cttcaaaatgctgctagtgtatcagcattattgttaactactgaagcagtagttgctgac
ttaccagaagacaacccagctcctgcagcaccagctccaggtatgggcggtatgatgtaa
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