Pediococcus pentosaceus ATCC 25745: PEPE_0676
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Entry
PEPE_0676 CDS
T00409
Name
(GenBank) Predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppe03019
]
PEPE_0676
Messenger RNA biogenesis [BR:
ppe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PEPE_0676
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ABJ67737
UniProt:
Q03GD5
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All DBs
Position
717468..718415
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AA seq
315 aa
AA seq
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MTKKITEFQNDEEMELFVLIKSAEKRVTKAGKDFISMKFQDRSGDIHGNCWDAKEEDFKN
FQPGRVVLLRGKRETYKNAPQVKIMAMRLATDEEPNDPTAYTEKGPVSAEKLREEFTQLM
FEINNPDWNRVVRYLLKKYDREFFSFPAAKTNHHAFEGGLAFHTLSIVNLAKSVAAQYEQ
VDQSLLIAGAILHDLGKTIELSGPIATQYTVEGNLLGHIVIVDEEIVEAAKDLKIDPSSE
SMVVLRHMIVAHHGLKEYGSPVEPHMLEAVILHALDELDAEIQMVSGALKNTQPGAFSER
IFGMDGRNFYKPESK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaaaaaataaccgaatttcaaaatgatgaagaaatggaattatttgtcttaatc
aaatctgcggaaaagcgggtgaccaaagctggaaaagattttatttcgatgaagtttcaa
gatcgatctggagacattcacggaaactgctgggatgctaaggaagaagattttaaaaat
ttccaacctgggcgagtagttcttctaagaggaaaaagagaaacttataagaatgctcca
caagtaaagattatggcgatgcgtttagctaccgatgaggaaccaaatgatcctactgct
tatactgaaaaaggaccggtttcagctgaaaaattgcgagaagaatttacgcaattgatg
tttgaaatcaacaatccagattggaatcgagtggttagatatttattgaagaagtatgac
cgcgaatttttcagttttccagcagctaaaactaaccatcatgcttttgagggtggtttg
gctttccacacgctttcaattgttaatttagctaagtcggttgctgctcaatatgaacaa
gtagatcaatctttattaattgcgggagccatcctacatgatctaggtaaaacgattgaa
ttatcagggcccattgcaactcagtatacggttgaaggcaatttgttggggcacattgtc
attgtcgacgaggagattgtggaagcagctaaggatttaaaaattgatccgagctctgaa
tcaatggtggtattaagacatatgattgttgctcatcatggtttgaaagaatatggttca
ccagttgaaccgcacatgctggaagcagttattttacacgcattggacgaacttgatgct
gaaattcaaatggtatctggagctttgaaaaatacacaacctggagctttcagtgaacga
atttttggtatggatggacgtaatttttataaaccagaaagcaaataa
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