Pediococcus pentosaceus ATCC 25745: PEPE_0842
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Entry
PEPE_0842 CDS
T00409
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppe03019
]
PEPE_0842
03009 Ribosome biogenesis [BR:
ppe03009
]
PEPE_0842
03036 Chromosome and associated proteins [BR:
ppe03036
]
PEPE_0842
Enzymes [BR:
ppe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PEPE_0842
Messenger RNA biogenesis [BR:
ppe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PEPE_0842
Ribosome biogenesis [BR:
ppe03009
]
Eukaryotic type
90S particles
RNase
PEPE_0842
Prokaryotic type
rRNA processing factors
PEPE_0842
Chromosome and associated proteins [BR:
ppe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PEPE_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
ABJ67902
UniProt:
Q03FX0
LinkDB
All DBs
Position
847745..848443
Genome browser
AA seq
232 aa
AA seq
DB search
MIKALEDDLSQTFDIHFNNHALLDEAFTQASYVNEHPHQELKFYERIEFLGDAVLQLIVS
EYLFKRYPEMPQGKLTRLRAAMVCEASFSDFAKECHFDQYIRLGKGEEKSGARQRSSLLC
DIFESFIGALYLDQGRAAVERFVRIVIFPKLDEGKFDHIIDHKSELQELLQKNGDVEIDY
ELVSEEGPENDLIFTVSVTADHKKLATGTGHSKKVAEQNAANQALQLLRRPK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagccttagaagatgacttaagtcagacgtttgatattcattttaataaccat
gcgttgttagatgaagcttttacgcaagcttcttatgttaatgaacatccacatcaagaa
ttaaaattttacgaaagaatcgaatttttaggagacgctgttttacaactaattgtctct
gaatatttgtttaagcgttatcctgaaatgccacaaggaaaactaacccgtttacgagct
gcaatggtttgtgaagctagttttagtgattttgccaaagaatgtcattttgaccaatat
attcgtttaggtaaaggagaagaaaaatccggcgctcgccagcgctcatcacttctttgt
gatatttttgaatcgtttattggtgctctttacctcgatcaaggtcgggcagctgtcgag
cgttttgtacgaatcgtcattttccctaaattagacgaaggcaaatttgatcacattatc
gaccataaatcagaacttcaagaattacttcaaaaaaatggagacgttgaaattgattat
gaattagtttctgaagaaggacctgaaaatgatttaatctttacggttagtgttacggct
gatcataaaaaactagcaactggaaccggacattccaaaaaggttgctgaacaaaatgcg
gctaatcaggcgctacaacttttacgtaggcctaaatag
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