Pediococcus pentosaceus ATCC 25745: PEPE_1271
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Entry
PEPE_1271 CDS
T00409
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PEPE_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_1271
Enzymes [BR:
ppe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PEPE_1271
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PEPE_1271
RecFOR pathway proteins
PEPE_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
NB-ARC
AAA_16
AAA_14
nSTAND3
AAA_3
AAA_22
RNA_helicase
DUF815
Bac_DnaA
AAA_25
TsaE
Sigma54_activ_2
AAA_24
TniB
IstB_IS21
NTPase_1
AAA_17
ABC_tran
Rad17
AAA_19
AAA_18
NACHT
NPHP3_N
Parvo_NS1
AAA_33
ATPase_2
AAA_11
bpMoxR
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABJ68312
UniProt:
Q03ER0
LinkDB
All DBs
Position
complement(1258348..1259361)
Genome browser
AA seq
337 aa
AA seq
DB search
MEDERITSAEVQSPDEENEELSLRPQTLHQYIGQDQIKHELEVYIAAAKNREEALDHVLL
YGPPGLGKTTLAMVIANEMNVQIRTTSGPAIEKPGDLVALLNELQPGDVLFIDEIHRLPK
VVEEMLYSAMEDFFVDIVVGQGPTAHPIHFPLPPFTLIGATTRAGLLSAPLRDRFGIVEH
MNYYNEADLANIVRRSAGIFNSHIDDQGAYEIASRSRGTPRISNRLLKRIRDFAEVENDG
QIDRQLVSQSLKLLQVDNRGLDRTDKKVLTTMIELYGGGPVGISTIAANIGEEPDTISEM
YEPYLLQIGFLKRTPRGRMVTERAYEHLGLIDQYMNK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaacggattacttctgcggaagttcaaagtccagacgaagaaaatgaagag
ttgtcgttaaggcctcaaacattgcatcaatatattggtcaggatcagattaaacatgag
cttgaagtatatattgccgcagccaaaaatcgcgaagaagcactagatcatgttctttta
tatggcccccctggactagggaaaacgactttagcgatggttattgctaatgaaatgaac
gttcagattcgaacgactagtggaccagccattgaaaaaccgggtgatttagtagctctt
ttgaatgagctacaacctggtgacgttttatttattgatgaaattcatcgattacctaaa
gtggtggaggaaatgctctattcagccatggaagatttctttgttgatattgttgtcgga
caaggaccaactgcacatccaattcattttcctttaccacctttcactttgattggagcg
actactagagcgggcttactctcagctccattacgagatcgctttggaattgttgaacat
atgaattactataatgaagcggatttagctaacattgttcgacgctctgcgggtattttt
aactcgcatattgacgatcaaggggcgtacgaaattgctagtcgctcacgaggaacaccg
cgaatttcgaatcgtctgttaaaacgaatccgagattttgctgaagtagaaaatgatgga
caaattgatcgccaattggttagtcagtccttgaaattacttcaagtagataatcgtgga
ctagatcggactgataaaaaagttctaactactatgatcgagctctatggaggcggtccg
gtaggaatttccaccattgcagctaatatcggtgaagaaccagatactatttcagaaatg
tatgaaccatacttgcttcaaattggattcctgaaaaggacgcctcgaggccggatggtt
acagaacgtgcctacgaacatctaggcttaattgatcaatatatgaataaatga
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