Pediococcus pentosaceus ATCC 25745: PEPE_1484
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Entry
PEPE_1484 CDS
T00409
Name
(GenBank) DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03030
DNA replication
ppe03430
Mismatch repair
ppe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEPE_1484
03430 Mismatch repair
PEPE_1484
03440 Homologous recombination
PEPE_1484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppe03032
]
PEPE_1484
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_1484
Enzymes [BR:
ppe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEPE_1484
DNA replication proteins [BR:
ppe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PEPE_1484
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PEPE_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_22
RuvB_N
AAA_19
AAA_5
DNA_pol3_gamma3
Cytidylate_kin
AAA_24
AAA_16
AAA_assoc_2
TIP49
AAA_7
AAA_14
LPP
Glyco_transf_21
DnaX_C
PIF1
DUF815
Rad17
BRI3BP
AAA_18
DUF6779
DUF5660
RNA_helicase
Sigma54_activat
Mg_chelatase
AAA_28
nSTAND3
FlaC_arch
WapI
FapA
Sas10_Utp3
NagJ_C
Csm1_N
Motif
Other DBs
NCBI-ProteinID:
ABJ68515
UniProt:
Q03E57
LinkDB
All DBs
Position
complement(1454199..1455944)
Genome browser
AA seq
581 aa
AA seq
DB search
MSYQALYRVWRPQKFDDMVGQDVVTRTLKNALITEQTSHAYLFTGPRGTGKTSAAKIFAK
AVNCHYLKDGEPCNECVTCKAITEGTLNDVIEIDAASNNGVEEIRDIRDKAKYAPTEADY
KVYIVDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPQKIPLTIISRTQRFDFKRITP
AQSYDRMVYILDQKGIQYDQKALAIIAKAAEGGMRDALSILDQVISFGNEEVTLDNALLV
TGSVNQKLLDQYLTQIFKQETSAALETLHQILDEGKDGQRLIEDLIAVQRNLLLYQEDPQ
LVQEQSLNDLSEAFTEEAAMVTGVELYQMIDTLNSIQQQMRFTTHPDVYLEVLTIKLSQR
KTAKVSTEAPTGSVDNQEVEQLRSEVSQLKQAIQKLQQNVKNTPSNSQSAQPKPKKKAVG
AKQVKTPANLTKIYPILENATKASLNTMQELWRDLMDMLSVTERALMHVSKPVAASKEGV
VVAFNYDFLFEKAVDNEVLRTELQQNLAKLTGSDFKVVYVTVEEWPEVRSGFLNTHHFDK
NQEKSEPEASEQSTPKADEDNQAVKKAVELFGSENVNIKND
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagcattataccgtgtttggcggcctcaaaagtttgatgatatggtcggt
caagacgtcgtcacgaggactttaaaaaatgcattaataactgagcagaccagccatgcg
tatctatttactggtccacgaggaaccggaaaaacatcggcagctaagatttttgctaag
gcggttaattgtcactatcttaaagatggtgagccttgtaatgaatgtgtgacttgtaaa
gcgattactgagggaaccttaaacgatgtaatcgaaattgatgcggcctcgaataatggt
gtcgaagaaattcgcgatattcgagataaggcaaagtatgctccaactgaagcagactac
aaagtctacattgttgatgaagtccatatgctatcaaccggagcatttaatgcgttgttg
aaaactttagaagaaccaccagctaatgtaatttttattttagcaacgacggaacctcaa
aagattccattaactattatttcaagaacacaacgttttgattttaaacgaattacacca
gctcaaagttatgatcgcatggtctatattttggatcaaaagggaatccagtacgatcaa
aaggctttagcaattatcgccaaggctgctgaaggtgggatgcgagatgcgttaagtatt
ttggatcaagtgatctcatttggtaacgaagaagtaactttagataacgccttattagtt
acaggaagtgttaaccaaaaactattagatcagtatttaacgcaaatttttaagcaagaa
acatcagcggcattagaaactttgcatcaaattttagatgagggtaaagatggacaacga
ttaattgaagacttaattgctgtccaaagaaatttactcttataccaagaagatccccag
ttggtgcaagaacaaagcttgaatgatctatcggaagcttttactgaagaagcagctatg
gtgactggcgtggagctatatcagatgattgatacgttgaatagtattcaacaacaaatg
cgcttcacgactcacccagatgtctatttggaagttttgacgattaagctatcacaacga
aaaactgcgaaagtttccaccgaagccccaaccggttccgtggataaccaagaagtggag
cagttacgttcagaagtcagtcaattaaaacaagcaattcaaaagctacaacaaaatgta
aaaaatacgccaagtaattcacaatcagctcagcctaaacctaagaaaaaagcggtaggg
gctaaacaagttaaaactcctgctaatttaaccaagatttatccgatcttggaaaatgct
actaaggccagtttaaatacaatgcaggaactctggcgcgacctaatggatatgctatct
gttacagaacgggctttaatgcacgtttctaagccagttgcagctagtaaagaaggagtg
gtcgtagcgttcaattacgactttctgtttgaaaaggccgtcgataatgaagtgcttcgt
actgaacttcaacaaaatttagctaagttaactggttccgattttaaggtagtttatgtt
acagttgaagagtggccagaggtgcggtcaggtttcttaaatactcatcattttgataag
aatcaagaaaaatctgaaccagaggcatcagagcaatctacacccaaagcggatgaagat
aatcaagctgttaaaaaagcggtcgaattatttggctctgaaaatgtaaatataaaaaat
gattaa
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