Pediococcus pentosaceus ATCC 25745: PEPE_1613
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Entry
PEPE_1613 CDS
T00409
Name
(GenBank) Exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppe
Pediococcus pentosaceus ATCC 25745
Pathway
ppe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PEPE_1613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppe03400
]
PEPE_1613
Enzymes [BR:
ppe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PEPE_1613
DNA repair and recombination proteins [BR:
ppe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PEPE_1613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF6365
Motif
Other DBs
NCBI-ProteinID:
ABJ68634
UniProt:
Q03DT8
LinkDB
All DBs
Position
complement(1590245..1591000)
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AA seq
251 aa
AA seq
DB search
MKLISWNVNGLRAAVKHGFLDVFKELDADIFCIQETKLQEGQIELELPHYYQYWNYAEKK
GYSGTAIFTKKKPLAVRYGLGIEEHDQEGRIITLEFEKFYVITCYTPNSQPKLKRLEYRM
AWDDAFRAYIDQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNKFTQLLNS
GFTDTYRYFYPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQIHTEIFGS
DHCPVELDLDI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcttatttcatggaatgtaaatggattgcgtgcagcggttaagcatggatttctg
gatgtttttaaggaactagatgcagatatattttgcatccaggaaacaaagttgcaagag
gggcaaattgaattagaattgcctcactactatcaatattggaattatgcggagaaaaaa
ggatattctggtacggcaatttttactaaaaaaaagccgcttgctgtaagatatggtctt
ggaattgaagaacatgaccaagaaggtcgtataattactttagaatttgaaaaattttac
gtaattacttgttatacaccaaattcacagccaaaattaaagagactagaatatcgaatg
gcttgggatgatgcatttagagcatacatagaccagttaaatcagcataaacccgttatt
ttctgtggagatttaaacgtggcgcaccaagagattgatttaaagaatgacaaaactaat
cataaaaatgcaggatttacagacgaggaacgcaataaatttacacagttattaaatagt
ggttttacagatacataccgatacttctacccctcaaaagaaggagtttattcttggtgg
agctatcgatttaatgcacgtgctaataatgctggatggcggattgactactttgttagt
tcaaaggcgttggatcaaaaattgactgacgcccagattcatactgaaatttttggttcc
gatcattgtccagtcgaattagatcttgatatataa
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