Polaribacter pectinis: H9W90_00095
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Entry
H9W90_00095 CDS
T08187
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ppec
Polaribacter pectinis
Pathway
ppec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9W90_00095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppec03021
]
H9W90_00095
Transcription machinery [BR:
ppec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9W90_00095
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF7443
Motif
Other DBs
NCBI-ProteinID:
QNM85562
UniProt:
A0A7G9LAB3
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All DBs
Position
complement(21661..22524)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQLIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAFLEQENERPPSAEEIAKKLDMTVNDVKESMKNSGRHV
SMDAPLIEGEDSNLYDVLNSGESPNPDRVLLHESLRIEINRALETLTPREADVVKLYFGL
GEHQPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILMTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaattaccaagcaggtaaccaatagagaaactgcatcattagacaaa
tatttacaagaaattggtaaagtagatttaattactgctgatgaagaagtagaattagca
cagcttattaaagctggtgaccaaagagcattagagaaattaacaaaagccaatttaaga
tttgtggtatctgttgcaaaacaatatcaaaatcaaggattaacattaccagatttaatt
aatgaaggaaatttaggtttaattaaagcggcaaaacgttttgatgaaactagaggtttt
aaatttatctcttatgcagtttggtggattcgtcaatctatcttacaagcattagcagaa
caatctagaattgtgcgtttaccgttaaataaaattggttctatcaataaaattaacaaa
atgtacgcatttttagagcaagaaaacgagcgcccaccaagtgctgaagaaattgcgaag
aaattagacatgactgttaatgacgtaaaagaatctatgaagaattctggacgtcacgta
tctatggatgctcctttaattgaaggtgaagattctaatttatacgacgttttaaattct
ggagaatctccaaatccagacagagttttattacacgaatctttaagaatcgaaattaat
agagctttagaaacattaactcctcgtgaagcagatgttgtaaaattatactttggttta
ggagaacaccaaccaatgactttagaagaaattggagaaactttcgatttaacaagagaa
agagttcgtcaaattaaagaaaaagcaattagaagattaaaacatacttctagatctaaa
atcttaatgacttacctaggctag
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