Polaribacter pectinis: H9W90_00175
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Entry
H9W90_00175 CDS
T08187
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03030
DNA replication
ppec03430
Mismatch repair
ppec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9W90_00175 (dnaE)
03430 Mismatch repair
H9W90_00175 (dnaE)
03440 Homologous recombination
H9W90_00175 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppec03032
]
H9W90_00175 (dnaE)
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_00175 (dnaE)
Enzymes [BR:
ppec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9W90_00175 (dnaE)
DNA replication proteins [BR:
ppec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9W90_00175 (dnaE)
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9W90_00175 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Menorin
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
QNM85577
UniProt:
A0A7G9LAC8
LinkDB
All DBs
Position
complement(38757..43097)
Genome browser
AA seq
1446 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCVQIAWQLHDEMGNVLEHNDFLVKPEGYNIPY
DAERIHGISTELAEEKGIDLDEGLQLFNEALGKTKFIVGQNLQFDINIMGCEFHRLGVEN
NLTSLPVLDTCTEKTALMCQIPGGRGGKFKLPTLTELHNHLFGVGFGEAHNATADVEATT
RCFLELIRLREFTKEQLDVDEDYFKNFSEENPKPIQVIGLKHINLKKESEQIRQRLEKLK
DTADTKSTSAGLAELKDVKFAHLHNHTQFSVLQSTMQIGNIVKAAAKDNMPAIAMTDTAN
MMASFHFVSAILNHNKNTDNPIKPIVGCEFNVCGDHKNKSVKDNGYQVVLLAKNKKGYHN
LAKMSSIAFVDGFYYVPRIDREIIKKYKEDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEEFKDDLYIELMRHNQQDETIVNETLLKFSKAHDVKIVATNNTFYLEKKDANAHDILL
CVKDGEKQATPKGKGRGYRYGLPNEEYYFKSSDEMKTLFADLPEAIINIQEIVDKIEIFT
LARDVLLPAFDIPEEFLFEEDKLDGGKRGENKFLRHLTYVGAEKRYGEITESIRERLDFE
LSVIEKTGYPGYFLIVEDFIREARNMDVAVGPGRGSAAGSVVAFCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGEDAKSKGKVAALRAEEKQLVEELKHMSFGNDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITDYVPVALAKDSDMYVTQFDNSVVEDAGLLK
MDFLGLKTLTLIKDTVKIVKAKHGVILDPETFPLDDEPTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFVEQAAANGHDAEKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMKDIKAVSFFMEEC
KRMGLEVLGPDLNESFLKFSVNKEGAVRFGMAAVKGVGAAAVRAIIKEREENGNYTSIFD
LAKRVDLRAANKKSFDSLIKAGAFDSFTDTHRAQYFATDEKGVTFLERSMKFGSKFQENE
NSAQVSMFGEASTVQFPEPDIPECETWGTMELLSQEKEVIGIYISAHPLDDFKNELKFCN
ASLKYFKADLAKFVNMNLAFAAIITDVQHRVSKAGKGWAMFTMEDYGDSHEFRIFGEDYL
RMKHFLVPNSFLFVRCTIQPGWTNKETGVAGEPRLKFTEMKLLHDIMDELCKKVTIQIPL
NEIKEDTILNLESILKNSPGKQGLNFTVWDEKEKLEVSLPSRNTKIHITNELLATLESQQ
IQFKLN
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatacagaaaccacaggtttacctaaaagttggaatgctccaata
acggatacagacaactggccaaggtgtgtgcaaattgcttggcaattgcatgacgaaatg
ggaaatgtattagaacacaacgattttcttgtaaaaccagaaggttataatattccttat
gatgctgaaagaattcacggaatttctacagaattagcagaagaaaaaggaatcgattta
gacgaaggtttgcaattatttaatgaagctttagggaaaacaaaatttattgttgggcaa
aatttacaattcgatattaatattatgggttgtgaattccatagattaggagtcgaaaac
aacttaacttccctcccagttttagatacttgtaccgaaaaaacggcattaatgtgtcag
attcctggaggtcgtggaggaaaatttaaattaccaactttaacagaattacacaatcat
ttatttggtgttggttttggtgaagcacacaatgcaactgccgatgttgaagcaacaaca
cgttgttttttagagttaattcgtttacgagaatttaccaaagaacaattagatgtagat
gaagattacttcaaaaatttctcggaagaaaacccaaaacctattcaggtaattggttta
aaacatattaatcttaaaaaagaaagcgaacaaattcgccaacgtcttgagaagttaaaa
gacactgcagatacaaaatcgacttctgctggtttggcggaattaaaagatgtaaaattt
gcacatttacacaatcacacgcaattttctgtgttacaatctaccatgcaaattggtaat
attgtaaaagctgctgccaaagataacatgccagccattgcaatgacagatactgcaaat
atgatggcgtcttttcattttgtaagtgcgattttaaatcataataaaaacacagacaac
ccaataaaaccgattgttggttgtgaatttaatgtatgtggagatcataaaaataagtcc
gtaaaagacaatggttatcaggttgttttgttagctaaaaacaaaaaaggatatcacaat
ttagcgaaaatgtcttccatcgcttttgtggatggcttttactacgttccaagaatcgat
cgagaaatcatcaaaaaatataaagaagatattattgttttaactggaaacttatatggt
gaagttccaagtaaaattttaaatctcggagaaaaacaagctgaagaagctttgctttgg
tggaaagaggaatttaaagacgatttatacattgagttgatgcgccacaatcaacaagat
gaaaccattgtaaatgaaactttattaaaattttctaaagcacacgatgttaaaattgtt
gcgacaaataacaccttttatttagagaaaaaagatgcaaatgcacacgatattttactg
tgtgtaaaagatggtgaaaagcaagcgacaccaaaaggaaaaggtcgtggttatagatat
ggtttgccaaatgaggaatattattttaaatcttcggatgaaatgaaaaccttatttgca
gatttaccagaagcgattatcaacattcaagaaattgtagataaaattgaaatttttacg
ttagcaagagacgttttattacctgctttcgatattcctgaagaatttttattcgaagaa
gataaactcgatggtggaaaacgtggagaaaataaattcttacgtcatttaacgtatgtt
ggtgcagaaaaaagatatggagaaatcacagaatccatcagagaacgtttagattttgag
ctttccgtaattgaaaaaacaggatatcctggttatttcttaattgtggaagattttatt
cgagaagccagaaatatggatgttgctgttggccctggacgtggttctgcagcaggttct
gtagtagcattttgtttatggattacaaacatcgacccaataaaatacgatttacttttt
gagcgtttcttaaatcctgaacgtgtttcaatgccagatatcgatattgatttcgatgat
gaaggtcgaggaagagttatggattatgtaattgataaatatggcgcaaatcaagtggcg
caaattattacctatggaaccatggctgctaaatcttctattagagatactgctagagtt
ttagatttaccactttttgaagccgatagaattgcaaaattaattcctggaattaaacta
aaaaatatttttggtgaagatgccaaaagtaaaggaaaagttgctgctttacgtgcagaa
gaaaagcaattagtagaagaattaaaacatatgtcttttggaaacgatttagtttctgaa
accattaataaagcaaccattttagaaggttctgttagaaatacaggaattcatgcttgt
ggtgtaattattacgcctggagatattacagattatgttcctgtggctttggcaaaggat
tcagacatgtatgttactcaatttgacaactctgttgtggaagacgcaggtttgttaaaa
atggactttttaggtttaaaaacgttgactttaattaaagacaccgttaaaattgtaaag
gcaaaacatggcgtaatattagatccagaaacgtttcctttagatgatgaaccaacttat
gagttgttccaaagaggagaaactgtaggtattttccaatatgaatctccaggaatgcaa
aaacacatgcgttctttaaaaccaacagtttttgcagatttaattgcaatgaatgccttg
tacagacctgggccaatggaatatattccgtcttttattaatagaaaacacggaacagaa
gatattgagtacgatttacctgccatggaagaatatttggcagaaacttacggaattaca
gtctaccaagagcaagtaatgttactctcgcaaaagttggcagattttaccaaaggtgaa
gccgatgttttacgtaaagcaatgggtaaaaaacaaattgcggttttagataaaatgaaa
ccaaaatttgtagaacaagctgctgcaaatggacatgatgcagaaaaattagaaaaaatt
tggaaagattgggaagcattcgcaagttacgcatttaacaaatcgcattctacttgttat
gcttggattgcttaccaaaccgcgtatttaaaagcacattatcctgctgaatatatggct
tctgtactttcgaataacatgaaagatattaaagccgtttcattttttatggaagaatgt
aaacgaatgggattggaagttttaggtccagatttaaatgaatcttttctaaaattctct
gtaaataaagaaggtgctgttcgttttggaatggcggctgtaaaaggtgttggtgctgct
gcagttagagcaattattaaagaacgagaagaaaacggaaattatacctccattttcgat
ttggcaaaacgtgtagatttacgtgctgcaaataaaaaatcgtttgatagtttaataaaa
gctggtgcttttgattcttttacagatacacacagagcacaatattttgcgactgacgaa
aaaggagttacctttttagagcgttctatgaaattcggaagtaagtttcaagaaaacgaa
aattctgcacaagtttctatgtttggcgaagcttctactgtgcaatttcctgaaccagat
attcctgaatgtgaaacttggggaactatggaacttttatcacaagaaaaagaagtgatt
ggaatttatatttctgcacatcctttagatgattttaaaaatgaattaaaattttgcaac
gcttcattaaaatatttcaaggcagatttagcaaaatttgtaaatatgaatttggctttt
gctgcgattattacagatgtgcaacacagagtttctaaagctggtaaaggctgggcaatg
tttacgatggaagattatggagatagccatgagtttcgaattttcggcgaagattattta
agaatgaaacactttttagttccaaattctttcctttttgtacgttgtacaattcaacca
ggttggacgaacaaggaaactggagttgctggagaaccaagattgaaatttacagaaatg
aaattgttgcacgatattatggacgagctttgtaaaaaagtaaccattcagattccacta
aacgaaattaaagaagacaccattttaaatttagaatctattttaaaaaattcgcctgga
aaacaaggtttgaattttacagtttgggacgaaaaagagaaattagaagtgagtttgcca
agtagaaatacaaaaattcatattacgaacgagttgttggcgactttggagagtcagcag
attcaatttaagttgaattaa
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integrated database retrieval system
