KEGG   Polaribacter pectinis: H9W90_03245
Entry
H9W90_03245       CDS       T08187                                 
Name
(GenBank) DUF853 family protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
ppec  Polaribacter pectinis
Brite
KEGG Orthology (KO) [BR:ppec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppec03400]
    H9W90_03245
DNA repair and recombination proteins [BR:ppec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     H9W90_03245
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 FtsK_SpoIIIE AAA_10 AAA TrwB_AAD_bind ResIII AAA_16 AAA_30 CbiA Zot AAA_19 AAA_7 ATG33 T2SSE Hydrolase MIF4G_like_2 AAA_6 SRP54 ABC_tran TraG-D_C P-loop_TraG Atrophin-1
Other DBs
NCBI-ProteinID: QNM86147
UniProt: A0A7G9LBZ8
LinkDB
Position
686266..687837
AA seq 523 aa
MSKQEEFFEFINEGYKTKGDFIELGAAMLGEETITDAIVKIPLKTLNRHGLIAGATGTGK
TKTLQVLAENLSEKGIPVLLMDIKGDLSGLAQPSPGHAKIDERHAKIGFPFEAKKFPIEI
LTISEQDGTKMRATISEFGPVLLSRILDLSETQSGIVAIIFKYCDDNKLPLLDIKDFKKV
LHYVTNEGKEEIQNEYGRISSSSTGAILRKIIEIEQQGGDLFFGEKSFEVEDLTRVDENG
RGIISVLRLTDIQDKPKLFSTFMLQLLAEVYETFPEQGDSGRPELIIFIDEAHLVFEEAS
KALLNQIESIVKLIRSKGIGLYFVTQNPKDVPEDILAQLGLKVQHALRAFTAKDRKAIKL
AAENYPSSDYYDTKDVLTKLGIGEAFVSVLNEKGIPTPLARTMLRAPMSRMDVLTEKEIS
QVINNSRLTHKYNQELDRESAYEMLNSKIDKINLAEEKAIKKAAEEKEKEKRAKEREAEK
QREEKATRRTYSRRSTRQNPIVKVLTSATFIRAAFGILKKVLK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgagtaagcaggaagaattttttgaattcattaatgagggttataaaaccaaaggagat
tttatagaattaggtgcagcaatgttaggagaagaaaccataacagatgccattgtaaaa
attcctttaaaaaccttaaatagacatggtttaatagctggcgcaacaggaacaggaaaa
acaaaaacactacaagttttagcggaaaatttatcagaaaaaggaattcctgtgctatta
atggacattaaaggagatctttctggtttggcgcagccaagtcctggacacgcaaaaatt
gatgaacgtcatgcaaaaattggtttcccttttgaagctaaaaagttcccaatagaaatt
ttaacaatttctgaacaagatggaacaaaaatgcgtgcaactatatcagagtttggtcca
gttttattatcaagaattttagatttgtctgaaacgcaaagtggaattgtagctattata
tttaaatattgcgacgataataagttaccacttttggatataaaagatttcaaaaaagtt
ctgcattatgttaccaacgaaggtaaagaagaaattcagaatgaatatggacgaatctca
tcttcttctacaggggcaattctgcgtaaaattatagaaatagaacaacaaggaggagat
ttattttttggtgaaaaatctttcgaagtagaagatttaactagagtagacgaaaacgga
agaggaattatttctgtgttgcgtttaacagatattcaagacaaaccaaaattgttctct
acatttatgttgcaattattggcagaagtatatgaaacttttccagaacaaggagattca
ggaagaccagaattaatcatttttatagatgaagcacatttggttttcgaagaagcttca
aaagcactattaaaccaaatagaaagtattgtaaaactgattcgttctaaaggaattggc
ttgtattttgtaactcaaaacccaaaagatgttccagaagatattttagcacaattaggt
ttaaaagtgcaacatgcattaagagcatttactgcaaaagatagaaaagcgattaagttg
gctgcagaaaattacccaagttcagattattacgacactaaagatgttttaacaaaatta
ggaattggagaagcatttgtttccgttttaaacgaaaaaggaattccaacacctttagca
agaactatgttgcgtgcaccaatgagtagaatggatgtacttacagaaaaagaaataagt
caggttataaataattctagattaacacataaatacaatcaagaattagatagagaaagt
gcctacgaaatgctaaactcaaaaattgataaaataaatttagcagaagaaaaagctatt
aaaaaagctgcagaagaaaaagaaaaagagaagagagcaaaagaaagagaagcagaaaaa
caaagagaagaaaaagcaacaagaagaacgtattctagaagaagtacaagacaaaatcca
atagttaaagtgcttacaagtgcaacttttattagagcggcattcggcatattaaagaaa
gttttaaaataa

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