KEGG   Polaribacter pectinis: H9W90_03730
Entry
H9W90_03730       CDS       T08187                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ppec  Polaribacter pectinis
Pathway
ppec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9W90_03730 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppec03019]
    H9W90_03730 (rny)
Messenger RNA biogenesis [BR:ppec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H9W90_03730 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH-I_KHDC4-BBP DUF5308
Other DBs
NCBI-ProteinID: QNM86241
UniProt: A0A7G9LC92
LinkDB
Position
785885..787453
AA seq 522 aa
MEGILLPAIVGVLIGIAVGFIIAKAMEKSKGKKLLNGTRKEAASILKEAKIDAESIKKEK
ILQAKEKFIELKSEHEKVILSREKKISDVEKRIRDRESQVASEVDKNKKLNKSLEQKEKD
YDFKLDFLENKESELEVMHKRHVDMLEQISGLSADEAKKELVTSLKDEAKTEAMAFVQTS
IEEAKLTAEQEARKVVLGTIQRVGVEQAVENCVSVFNLESDDVKGRIIGREGRNIRALEA
ATGVEIIVDDTPDAIILSCFDPIRREIARLSLHKLVTDGRIHPARIEEVVGKTEKQITQE
IIEVGKRTVIDLGIHGLHPELVKAVGRMKYRSSYGQNLLQHSREVANLCGIMAAEMGLNS
KVAKRAGLLHDIGKVPNEESELPHALLGMQWAEKYGEKPDVCNAIGAHHDEIEMKTLISP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEAIAFGFTGVQKAYAIQAGRELRVMVESTK
VNDTKAAELSFSISQKIQNDMTYPGQVKVTVIRETRAVNVAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggaaggaatactactacccgctattgtgggagttttaataggaattgcagttggtttt
atcattgcaaaagctatggaaaaatcaaaaggtaaaaaattacttaatggtacaagaaaa
gaagctgcttctattctaaaagaagctaaaattgatgcagaatcaattaaaaaagaaaaa
atactacaagcaaaagagaaatttatagagcttaaatcggaacacgaaaaagtaatctta
tctagagaaaagaaaatttctgacgtagaaaaacgtattagagatagagaatctcaagtg
gcatctgaagtagataaaaataaaaaactgaataagtctttagagcaaaaagagaaagac
tacgattttaagttagattttttagagaataaagaaagtgagttagaagtaatgcacaaa
cgtcatgtagatatgttagagcaaatctctgggctttctgcagatgaagcaaagaaagaa
ttagttacttcattaaaagacgaagcaaaaacagaagcaatggcttttgttcaaacatct
atagaagaagcaaaattaacagcagaacaagaagctagaaaagtagttttaggtactata
caaagagttggtgtagaacaagctgtagaaaactgtgtatctgtctttaacttagaatca
gatgatgttaaaggaagaattattggtagagaagggcgtaatattagagctttagaagct
gcaacaggtgtagaaattattgtagatgacacaccagatgcaattatactttcttgtttc
gatccaattagaagagaaatagcacgtttatctttacataaattggttacagatggtaga
attcacccagcaagaattgaagaagttgttggtaaaacagaaaaacaaattactcaagaa
attatagaagttggtaaaagaacagtaatcgatttaggaattcatggtttacatccagaa
ttagtaaaagcggttggtagaatgaagtacagatcttcttacggacaaaatttattgcaa
cactctagagaagttgctaatttatgtggaattatggctgcagaaatggggttaaattct
aaagtagcaaaacgtgcaggtttattacacgatattggtaaagtaccaaatgaagaaagt
gagttacctcacgctttattaggaatgcaatgggcagaaaaatatggtgaaaaaccagat
gtttgtaatgctattggagctcaccatgatgagattgaaatgaaaacattaatttctcct
atcgttcaagtttgtgatgcaatttcaggagcaagaccaggagcaagacgtcaagtttta
gattcttacatacaacgtttaaaagatttagaagcaatcgcttttggctttacaggagtt
caaaaagcttacgcaatacaagcaggacgtgagttacgtgtaatggtagaaagcacgaaa
gttaacgacaccaaagcagcagaattatcatttagtatttcacaaaaaatacaaaatgat
atgacgtatccaggtcaagtaaaagtgactgtaattagagaaacaagagcagtaaacgta
gcaaaatag

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