Polaribacter pectinis: H9W90_04660
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Entry
H9W90_04660 CDS
T08187
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec00260
Glycine, serine and threonine metabolism
ppec00460
Cyanoamino acid metabolism
ppec00630
Glyoxylate and dicarboxylate metabolism
ppec00670
One carbon pool by folate
ppec00680
Methane metabolism
ppec01100
Metabolic pathways
ppec01110
Biosynthesis of secondary metabolites
ppec01120
Microbial metabolism in diverse environments
ppec01200
Carbon metabolism
ppec01230
Biosynthesis of amino acids
ppec01240
Biosynthesis of cofactors
ppec04981
Folate transport and metabolism
Module
ppec_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H9W90_04660
09102 Energy metabolism
00680 Methane metabolism
H9W90_04660
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H9W90_04660
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
H9W90_04660
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H9W90_04660
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
H9W90_04660
Enzymes [BR:
ppec01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
H9W90_04660
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QNM86420
UniProt:
A0A7G9LCS1
LinkDB
All DBs
Position
complement(983661..984935)
Genome browser
AA seq
424 aa
AA seq
DB search
MQLDNQIFDLIQEEKERQLNGLELIASENFVSDQVMQAQGSILTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKELFGAEYVNVQPHSGSQANTAVFSACLKPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVDKETGTIDYNHLEQQAKEYKPKLIIAGASAYSRDIDFKKFR
EIADSVGAILMADISHPAGLIAKGILNDPIPHCHIVTTTTHKTLRGPRGGMIMIGKDFDN
PFGETLKNGNPKKMSTLINSSVFPGNQGGPLEHVIAAKAVAFGEALTDEFLEYQLQVKEN
AAAMAKEFVAKGYDIISGGTDNHCMLIDLRNKDISGKDAEIALGKADITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGLKEEDMVAVVNFIDEAIQNANNEEALHEIAERVNDMMSARR
LFVM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaattagacaatcaaatttttgaccttattcaggaggaaaaagaaagacaattaaac
ggtttggaattaatcgcttcagaaaactttgtaagcgaccaagttatgcaagctcaaggt
tctattttaactaataaatatgctgaaggatatcctggtaaaagatattatggaggttgt
gaagttgtagatgttatagaacaaatagcaattgatagagctaaagaattatttggtgca
gaatacgtaaatgtgcaaccacattctggttctcaagcgaatacagctgttttttcagcg
tgtttaaaacctggagatactattttaggtttcgatttatctcatggtggacatttaaca
catggttctccagtaaatttttctggtaaattatacaatcctgtattttacggagttgat
aaagaaactggtaccattgactacaatcatctagagcaacaagcaaaagaatacaaacca
aaattgattattgctggtgcatctgcatattctagagacatagattttaagaaatttaga
gaaattgcagatagtgttggagctattttaatggcagatatttcgcatcctgcaggttta
attgcaaaaggaattttaaatgatccaattcctcattgtcatattgttacaacaacaaca
cacaaaactttacgtggaccaagaggaggaatgattatgattggtaaagatttcgacaat
ccgtttggagaaactttaaagaatggaaatcctaaaaaaatgtctactttaattaattct
tctgtttttccaggaaaccaaggtggacctttagagcatgttattgctgctaaagctgtt
gcttttggagaagctttaacagatgagtttttagaatatcaattacaagtaaaagaaaat
gcagctgcaatggcaaaagaatttgtagcaaaaggatatgatattatttctggcggaaca
gacaaccattgtatgttaattgatttaagaaataaagatatttctggtaaagatgcagaa
attgctttaggaaaagctgatattacagtaaacaaaaacatggttccttttgatgataaa
tctccttttgtaacgtctggaattcgtgttggaactgcagcaattacaactcgtggctta
aaagaagaagatatggttgctgtagttaattttattgatgaagcaattcagaatgcgaac
aatgaagaagcattacacgaaattgcagaacgtgtaaatgatatgatgagcgcaagaaga
ttatttgtaatgtaa
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