Polaribacter pectinis: H9W90_04990
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Entry
H9W90_04990 CDS
T08187
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03420
Nucleotide excision repair
ppec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9W90_04990
03430 Mismatch repair
H9W90_04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_04990
Enzymes [BR:
ppec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9W90_04990
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9W90_04990
MMR (mismatch excision repair)
Other MMR factors
H9W90_04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
AAA_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QNM86479
UniProt:
A0A7G9LCY0
LinkDB
All DBs
Position
complement(1054607..1056928)
Genome browser
AA seq
773 aa
AA seq
DB search
MNSYLNSLNEAQKQAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMKQGVDSFNILSLTFT
NKAAKEMKARIAGVVGNSEAKNLWMGTFHSVFARILRSEADKLGFPSNFTIYDSQDSVRL
ITAIIKEKNLNKEQYKPKQILNRISSFKNSLITVRAYFNNSDLQEADLHASRPEVGNIYK
EYVDRCFKAGAMDFDDLLLRTNELLARFPETLAKYQDRFRYIMVDEYQDTNHSQYLIVKA
LADKFGNICVVGDDSQSIYSFRGANIQNILNFQKDYPDVKTFKLEQNYRSTSNIVNAANS
VIARNKTKLDKEVWTSNDAGDSINVMRTISDGEEGRFVAQSIWENQMNHQLSSDNFCVLY
RTNSQSRAIEDALRKKGIDYKIYGGISFYQRKEIKDILSYLRILINPNDEEALKRIINYP
ARGIGATTIDKLTIAANHYKKSIFDIIKYIDKIDLKINSGTKNKLQNFMNMMLRLQIESK
TKNAFEIAETVVKQTLLIKDLEKDGTPEAVSKVENVQELLNGIKDFITDKIEEGADASLT
TFLEDVALATDFDSEKNDDKPSVSLMTIHQSKGLEYMYVYVVGLEENLFPSAMSMNTRSE
LEEERRLFYVALTRAEKVAYLTYAQTRYRWGKLVDAEPSRFLEEIDDQYLHYITPKVPEP
SINRFVDKSIFDDAPKGIRFQKPIQRKKMERDLAKKKEIIIPKNLKKVSQVGAKANLFDG
NISVGNIVEHNRFGSGEVIALEGNGPNKKAEIKFGTVGKKKLLLQFAKLKVIG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagttacttaaattctttaaacgaagctcaaaaacaagcagttttacaaaaagat
ggcccaatgattattattgctggtgcaggttctggtaaaacacgtgtattaacttacaga
attgctcatttaatgaaacagggcgtagattcgtttaatatattatcattaacatttacc
aacaaagcagctaaagaaatgaaagcaagaattgctggagtagttggtaatagtgaagca
aaaaacctttggatgggaacatttcactcggtttttgcaagaattttacgttcggaagca
gataagttgggctttccttcaaattttacaatttacgattcacaagattctgttcgtttg
ataactgcaattattaaagaaaaaaacttaaataaggaacaatacaagccaaaacagatt
ttaaatagaatatcttcttttaaaaatagtttaataacggttagagcatattttaataat
tccgatttacaagaagcagatttgcatgctagcagaccagaagtgggtaatatttacaag
gaatatgtagatagatgctttaaagctggtgcaatggattttgatgatttattgttaaga
accaacgagttattagcccgttttccagaaactttagcaaaataccaagatcgttttaga
tatattatggtagatgagtatcaagatacaaatcactcgcaatatttaatcgtaaaagcg
ttggcagataaatttggtaatatttgtgtggttggagacgattcccaaagtatttatagt
tttagaggtgcaaatattcagaatattttaaattttcagaaagattatcctgatgttaaa
acctttaaattagagcaaaattatagatctacaagtaatattgtaaatgcagcaaactct
gtaatagcaagaaataagaccaaattagataaagaggtttggacttctaacgacgctgga
gattccataaacgtaatgcgaacaatttctgatggtgaagaagggcgatttgtagcacaa
tctatttgggaaaaccagatgaatcatcaattaagttccgataatttttgtgttttgtat
agaacaaattcacaatcacgagctattgaagatgctttaagaaaaaaaggaatcgattat
aaaatttatggtggaatttccttttatcaacgtaaagaaattaaagacatcctgtcttac
ttacgtatattaatcaacccaaatgacgaggaagctttaaagagaattataaattatcct
gcaagagggattggtgcaacaaccatagacaaactaacaatagctgcaaatcattataaa
aaatctattttcgatattataaaatatatcgataaaattgatttaaaaataaattctgga
acaaaaaataagttgcagaattttatgaatatgatgttgcgacttcaaatagagtcaaaa
acaaaaaatgccttcgaaattgcagaaactgttgtaaaacaaacacttttaattaaagat
ttagaaaaagacggaactccagaagcagtaagtaaagtagagaatgttcaagaattatta
aacggaattaaggattttattacagataagattgaagaaggagcagatgcatctttaact
acatttttagaagatgtggctttggctacagatttcgattcagaaaaaaatgatgataaa
ccaagcgtttctttaatgaccattcaccaatctaaaggtttggaatatatgtatgtgtat
gttgttggtttagaggaaaatttatttccttctgcaatgagtatgaatactagaagtgag
ttggaagaagaacgtaggttattttacgtagcgttaaccagagcagaaaaagttgcttat
ttaacctacgcacaaacgcgttacagatgggggaaattggtagatgcagaaccaagtagg
tttttagaagaaatagacgatcaatatttacattatataacaccaaaagtaccagaacct
tctataaataggtttgtagataaaagtattttcgatgatgctccaaaaggaattcgcttt
caaaaaccaattcagcgtaaaaaaatggaacgtgatttggcaaaaaagaaagaaattatt
attcctaaaaacctaaaaaaagtttctcaagtaggagcaaaagcgaatctatttgatggc
aatatttctgtaggtaatatcgttgaacataatagatttggtagtggagaagtgatagct
ttggaaggaaatggacctaataaaaaagcagaaattaaatttggtacagttggtaaaaag
aaattgttattacaatttgccaaattaaaagtgattggttaa
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