Polaribacter pectinis: H9W90_06110
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Entry
H9W90_06110 CDS
T08187
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03030
DNA replication
ppec03430
Mismatch repair
ppec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9W90_06110 (dnaX)
03430 Mismatch repair
H9W90_06110 (dnaX)
03440 Homologous recombination
H9W90_06110 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppec03032
]
H9W90_06110 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_06110 (dnaX)
Enzymes [BR:
ppec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9W90_06110 (dnaX)
DNA replication proteins [BR:
ppec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9W90_06110 (dnaX)
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9W90_06110 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
RCF1-5-like_lid
AAA_22
AAA_14
AAA_5
Rad17
AAA_30
TIP49
DNA_pol3_gamma3
AAA_16
nSTAND3
AAA_assoc_2
AAA_7
Mg_chelatase
DUF815
DNA_pol3_delta_C
Sigma54_activ_2
AAA_2
AAA_18
NPHP3_N
AAA_24
RNA_helicase
RsgA_GTPase
Sigma54_activat
T2SSE
ABC_tran
GNAT_acetyltr_2
Motif
Other DBs
NCBI-ProteinID:
QNM86689
UniProt:
A0A7G9LDJ0
LinkDB
All DBs
Position
1295970..1297670
Genome browser
AA seq
566 aa
AA seq
DB search
MEHFIVSARKYRPQNFEDVIGQQAITNTLENAIKNNHLAQALLFTGPRGVGKTSCARILA
KKINQQDAELSEDEDFAFNIFELDAASNNSVDDIRSLTDQVRIPPQTGKYKVYIIDEVHM
LSQAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIFDFKRIGVLDAKNYLKTI
CEKENITAEDDALHIIAQKADGAMRDALSIFDRVVSFSGKNLTREAVTENLNVLDYETYF
GMTDLLLGNKIPDVLNAFNAVLAKGFEGHHFINGLASHFRDLLVAKDKATLELLEVGDAA
KKKYLAQATKASIPFLMQSIDKANQCDLNYRASKNQRLLVELSLMQIASITFDGEKKKSP
NYIIPATFFQALSPAVKEIAKPIPKKVETIKPQQKQVVPETKTQPKKPIILENVKRRTSA
FSLKSIHQKKETKKVDVEENYDSHPKDVFTQEQLQTLWKEYTALMLQKGERSMASIIGTD
VPVLHENFKIQFTLPNKLMQDQFHKGRPKLLKFLREKLNNYGLSIDTNVNETIEKKFAYT
PQEKYNRLKELNPLLDKLRQTFELDL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttatagtttctgcacgtaagtatcgtcctcaaaatttcgaggatgttatt
gggcaacaagccattacaaatacgttagagaatgctataaaaaacaatcatttagcgcaa
gctttattgtttactggacctcgtggagttggtaaaacttcttgtgctagaattttggcg
aagaaaataaaccaacaagatgcagaactttctgaagacgaagattttgcttttaatatt
tttgaactcgatgctgcttctaacaattctgtagatgatattagaagtttaacagaccaa
gttcgtattccaccacaaacaggaaaatacaaagtttatattatagatgaggtacatatg
ttatctcaagcagcttttaatgcttttttaaagacgttagaagaacctcctgcacatgct
atttttattttagcaactacagaaaaacataaaataattccgactattttatctcgttgt
cagattttcgattttaaaagaattggtgttttagatgcaaaaaactatcttaaaaccatt
tgcgagaaagaaaatattactgcagaagatgatgcgttgcatattatagcacaaaaagca
gatggcgcaatgcgagatgctttatctatttttgatagagttgttagtttttctggaaag
aatttaactagagaagctgttacagaaaacttaaacgttttagattacgaaacctatttt
ggaatgacagatttgttgttgggaaataaaattccggatgttttaaatgcgtttaatgct
gttttagcaaaaggttttgaaggacaccattttataaacggattggcaagtcattttaga
gatttgttagttgcaaaagacaaagctacgttagaattgttagaagttggcgatgctgca
aaaaagaaatatttagcacaagcaaccaaagcaagcattccttttttaatgcaatctata
gacaaagcaaaccaatgcgatttgaattatagagcaagtaaaaatcagcgtttgctggtg
gaattatctttaatgcagattgcctctatcacttttgatggagaaaaaaaaaagtcacct
aactacataattcccgctacattttttcaggcgctttctcctgctgtaaaagaaattgca
aaaccgattccgaaaaaggttgaaacaattaagccgcagcaaaaacaagttgttccagaa
acaaaaacgcaaccgaaaaaaccaattattttagagaatgtaaaaagacgtacttctgcc
ttttctttaaagagtattcatcagaaaaaagaaactaaaaaggttgatgttgaagaaaat
tacgacagccatccaaaagatgtttttacacaagaacagcttcaaactttatggaaagaa
tacactgctttaatgttgcaaaaaggagaaagaagtatggcatctattataggcacagat
gttcctgtattgcatgaaaactttaaaattcagtttacgcttcctaataaattaatgcaa
gatcagtttcataaaggaagaccaaaattattaaaattcttacgagaaaaactaaataat
tatggactttctatagacacaaatgtgaatgaaaccattgagaaaaagtttgcatatact
ccacaagaaaaatacaatagattaaaggagctaaatcctttattagataaattacgccaa
acttttgagctggatttatag
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