Polaribacter pectinis: H9W90_08340
Help
Entry
H9W90_08340 CDS
T08187
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H9W90_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppec03021
]
H9W90_08340
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_08340
Enzymes [BR:
ppec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H9W90_08340
Transcription machinery [BR:
ppec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H9W90_08340
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H9W90_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QNM84219
UniProt:
A0A7G9L6H0
LinkDB
All DBs
Position
complement(1829990..1830982)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFSGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRVD
GVEHEFSTVSGIVEDVTEIILNLKQVRFKKQIEDTDRETVSVSVSGQEQFTAGDLQKFIS
GFQVLNPDLVICNMDKSVKLNAEITIEKGRGFVPAEENKKASAPIGTIFTDSIYTPIKNV
KYAIENFRVEQKTDYEKLVFDIDTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTRLIDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELEELVIVKGLNFGMDLTKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcaaaagcccgataaagttataatgatagaatctacagatttt
tctggtagatttgagttcagacctttagaaccaggttttggtttaacggttggaaatgcg
ttaagaagagtacttttatcatctttagaaggatttgcaattacatcattaagagtagat
ggtgtagagcatgagttttctacagttagtggtatcgtagaagatgtaacagaaattatc
ttaaacttaaaacaagttcgttttaagaaacaaattgaagatacagacagagaaacagtt
tctgtatctgtatctggtcaagagcagtttactgcaggagatttacagaaatttatttct
ggttttcaagtattgaatccagatttagtaatctgtaacatggataaatctgtaaagtta
aatgcagaaattactatagaaaaaggtagaggatttgtacctgcagaagaaaataaaaaa
gcttcagcaccaataggaacaatctttacagattctatttacacgccaattaagaatgta
aagtatgcaatcgaaaactttcgtgtagagcaaaaaacggattatgaaaaattagttttc
gatatcgatactgatggatcaatcaatcctaaagatgctttaactgaagctgcaaagata
ttaatccaccactttatgttattctctgatgagcgtatcactttagaggcagatgaaatt
gcacaaactgaaacatatgatgaagaatcattacacatgcgtcagttattaaaaactaga
ttaatcgatatggatttatctgtaagagctttaaattgtttaaaagctgcagaagtagat
acattaggagatttagtttcctttaacaaaagcgatttaatgaagttccgtaacttcggt
aaaaaatcattaacagaactagaagaattagttattgttaaaggtttaaatttcggaatg
gatttaacaaaatacaaattagatagagattaa
DBGET
integrated database retrieval system
