Polaribacter pectinis: H9W90_08990
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Entry
H9W90_08990 CDS
T08187
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ppec
Polaribacter pectinis
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppec03032
]
H9W90_08990 (gyrB)
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_08990 (gyrB)
Enzymes [BR:
ppec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H9W90_08990 (gyrB)
DNA replication proteins [BR:
ppec03032
]
Prokaryotic type
DNA Topoisomerases
H9W90_08990 (gyrB)
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9W90_08990 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNM84343
UniProt:
A0A7G9L6U4
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All DBs
Position
complement(1990392..1992329)
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AA seq
645 aa
AA seq
DB search
MSEENKNNYDASSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGYCD
TIDVTINEDNSITTKDNGRGIPVGIHKKEGVSALQVVMTKIGAGGKFDKDSYKVSGGLHG
VGVSCVNALSDHLRATVHKEGKVWEQEYEKGKALYPVKTIGETDFTGTIVTFLPDTSIFQ
QSTEYNYETLATRMRELAYLNKGITITLTDKRNTDDEGNFVSETFHSKEGLPEFIKYLDS
TREQLIGSVISMEGEKNGIPVEVAMVYNTSYAENLHSYVNNINTHEGGTHLSGFRRGLTG
TLKKYADESGLLKNVKFDIAGDDFREGLTAIVSVKVQEPQFEGQTKTKLGNREVTSAVSQ
AVSEMLTDYLEENPNDAKIIVQKVILAATARHAARKAREMVQRKTVMSIGGLPGKLSDCS
ETDPAQCEIFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNMF
TALGVSIGTEEDPRALNLSKVRYHKVVIMCDADVDGSHIATLILTFFFRYMREMVEQGYI
YIATPPLYLVKKGQKKEYAWDDNQRDIIAQQMGGSVSIQRYKGLGEMNAEQLWDTTMNPE
FRTLRKVVIDSPTEADRVFSMLMGDDVPPRRDFIERNAKYANIDV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacaaaaataattatgacgcgtccagtattcaggcattagaaggaatg
gagcacgtaagaatgcgtccatccatgtatattggagacgttggcgtacgtggtttacac
catttagtgtatgaagttgtagataactctattgatgaagcaatgggtggttattgtgat
acaattgatgttacaataaacgaagacaattctattacaaccaaagataatggacgtgga
attcctgttggaattcacaaaaaagaaggtgtttctgctttacaagtagtaatgactaaa
attggtgctggtggtaaattcgacaaagattcttataaagtttctggaggtttacatggt
gttggtgtaagttgtgtaaacgcactttcagaccatttaagagcaacagtacataaagaa
ggtaaagtttgggaacaagaatacgaaaaagggaaagctttatatcctgttaaaacaata
ggagaaacagattttacaggtacaattgttacttttttaccagatacttctatttttcag
caatctacagaatacaactatgaaacgctagcaacgcgtatgcgtgaattagcgtatctt
aataaaggtatcacaatcaccctaacagataaaagaaatacagatgatgaaggaaacttt
gtttctgaaacatttcactctaaagaaggtttacctgaatttatcaaatatttagattct
actcgtgagcaattaattggttctgtaatttctatggaaggtgaaaaaaatggtattcct
gtggaagttgccatggtttataacacttcttatgcagagaatttacattcttatgtaaac
aatattaacacacatgaaggtggaacacatttatctggttttagacgtggtttaacaggt
actttaaaaaagtatgcagatgaatctggcttattgaaaaacgtaaagtttgatattgct
ggagacgattttcgtgaaggtttaactgcaattgtttcagtaaaagttcaagaaccacaa
ttcgaaggacaaacaaaaacaaaattaggtaacagagaagttacttctgcagtttcgcag
gcggtttcagaaatgttaacagattatttagaggaaaacccgaatgatgcaaaaataatt
gttcagaaagtaattttagcagcgactgcaagacacgcagcacgtaaagccagagaaatg
gtgcaacgtaaaactgtaatgtctattggtggtttacctggtaaattatctgactgttca
gaaactgacccagcacaatgtgaaatattcttggttgagggagattctgcaggtggaaca
gcaaaacaaggtcgtgatcgtaattttcaagcaattttaccacttcgtggaaagatttta
aatgttgaaaaagcgatgcaacataaagttttcgaaaacgaagaaataaaaaacatgttt
actgctttgggagtttctatcggaacagaagaagacccaagagctttaaatttatctaaa
gtaagatatcataaagtagttataatgtgtgatgccgatgttgatggttcgcatattgct
accttaatattaactttcttctttagatatatgagagaaatggtagagcaaggttatatt
tacattgcaactccacctttatatttagtaaaaaaaggtcagaaaaaagaatatgcttgg
gatgataatcaacgtgatataatcgcacagcaaatgggaggatctgtttctattcaacgt
tataaaggtcttggagagatgaatgcagagcaattatgggacactaccatgaaccctgaa
tttagaactttaagaaaagtggttattgatagcccaacagaagcagacagagttttctct
atgctaatgggagatgatgttccgccaagaagagattttattgaaagaaacgcaaagtat
gcaaatattgatgtgtaa
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