Polaribacter pectinis: H9W90_09005
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Entry
H9W90_09005 CDS
T08187
Symbol
aspS
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H9W90_09005 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppec01007
]
H9W90_09005 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppec03016
]
H9W90_09005 (aspS)
03029 Mitochondrial biogenesis [BR:
ppec03029
]
H9W90_09005 (aspS)
Enzymes [BR:
ppec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
H9W90_09005 (aspS)
Amino acid related enzymes [BR:
ppec01007
]
Aminoacyl-tRNA synthetase
Class II (A)
H9W90_09005 (aspS)
Transfer RNA biogenesis [BR:
ppec03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
H9W90_09005 (aspS)
Prokaryotic type
Other AARSs
H9W90_09005 (aspS)
Mitochondrial biogenesis [BR:
ppec03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
H9W90_09005 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2b
tRNA-synt_2d
DUF3804
DUF8128
Motif
Other DBs
NCBI-ProteinID:
QNM84346
UniProt:
A0A7G9L6U7
LinkDB
All DBs
Position
1994698..1998051
Genome browser
AA seq
1117 aa
AA seq
DB search
MELDQIQDALKAHDLELIIGLETHVRLNTNSKLFCSCPNEETEIPNTNICSVCTGQMGVL
PAINKEAITKAIYFGKAVKSTFSNEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGEVSC
YRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCIRNIEDASTY
AQYIQRIVQNLGISEANLEKGEFKSDVSVSLRKKHTYNLNPRTEIKNLNSFKFMVDALKE
EIEKQLNYYTEHKEFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDIPFVSIKDVV
NSIKIDASALPHAVESVLIKGGVLPQDAKFFTADAIRSKTFMTINNALQDPSFVAKTLVN
NIGAEEYENIHDINHLIEIFELFKADKITSVLVQNGITSYLKDRTFDFKKYFDDNTISEA
QIFEAIEKVISENEAIANDIKAGNQGKAGILVGKVIAIIGKGASGKVIRTGILEQLAGEK
AGSGKMEVGSNKSEGGSGKLEAGSESKFEKEEELPEIPIVIKEEYRTHKISQLSEESITE
KVTLSGWVSSVRDHGELMFIDLRDSSNQVFQVRLSRESFPNLDELVKLKPESVISVTGVV
VQRNEDDYNAGLRTGKLELETSDLEILNLSKTLPFEIKRATKSNETVRFQYKFLDHRNDD
VRRAIVNRHKVIKLLRDILDEEEFLEIETPILTAGTDEGAREFIVPTRKQSGSFYTLPQA
PQQFKQMLMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFN
EVVRKIYGKKWILHPFEVITYKDAMDKYGCDRPDLRYGLQMQDITDIVKDTTFQVFSKPI
EEGGIVKCIKVSAKEQGNKRMSKGQIENLTAIAQQNGLGGLAYIIVNENDLQSPIIKFLG
EEIAANIIKTTNAQIGDIVFFSAADYATANKALDAVRQEMGRILKLINPKELKPAWVVDF
PMFEKTDEGRWTFTHNPFSMPAVYDLEKHMTGNDDEIGTIIAQQYDLILNGYEIGGGSVR
AHKAEILEATYKNMGYDKEGMLKSVGTMYKAFQYGAPPHGGIAWGIDRLMMILEKKASIR
EVMAFPKTGSSEDLLFNAPSILSDKKVEEMNVRIIKK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggaattagatcaaatacaagatgctttaaaagcacacgatttagaattaattatcggt
ttagaaacgcacgttcgtttaaatacaaactcaaaattattttgttcttgccccaatgaa
gaaactgaaattcctaacacaaatatttgttccgtttgtacaggtcaaatgggagttttg
ccagcaattaacaaagaagcaattacaaaggcgatttatttcggaaaagcagtaaaatct
actttttctaacgaagttatttcttgggacagaaaacattatgaatatcctgataatcca
aagaatattcaaattacgcagtttcataatcctgtgattccagatggagaagtttcttgt
tatagaaacgatggttctcaattcactgtgaatttaacgcaagtgcatattgaagaagat
gccgcaaaattaatgcacgaaaagaagatttcgttagtcgattttaacaaagctggagtt
cccttaattgaaattgtaactgaaccctgtatcagaaatattgaagatgcttcaacgtat
gcacaatatattcagcgaattgttcagaatttaggaatttcggaagcgaatttagaaaaa
ggggaattcaaatcggatgtttctgtttcacttcgaaaaaaacacacttataatttaaat
ccaagaacggaaatcaaaaacctgaattctttcaagtttatggtggatgctttaaaggaa
gaaattgagaaacaacttaattattatacagaacataaagaatttagaccagaccaaaca
acggttttgtgggatgcagatttaaagcaaaccaaaacaatgcgtaaaaaggaatttgaa
gcagattatcgttttatttctgaaccagatattccttttgtttcgataaaagacgtagta
aattctataaaaattgatgcaagtgctttgcctcacgcagttgagtctgtattaattaaa
ggcggagttttaccacaagatgccaagttttttactgcagatgccattcgttctaaaaca
tttatgaccataaataatgctttgcaagatccgtcttttgtggcaaaaacgttggtaaat
aatattggtgcagaggaatatgaaaatattcacgatatcaatcatttaattgagattttt
gagctttttaaggctgataaaataacgtctgttttagttcaaaacggaattacatcctat
ttaaaagacagaacttttgactttaaaaagtattttgatgacaatacaatttctgaagct
caaatttttgaagctatcgaaaaagtaatttcagaaaatgaagccatcgcaaacgatatt
aaagcaggaaaccaagggaaagcaggaattcttgttggaaaagtaattgcaattattgga
aaaggagcttctgggaaagtgattcgtactggtatattggagcaacttgcaggagaaaaa
gctggaagtgggaagatggaagttggaagtaataaatctgaaggtggaagtgggaagttg
gaagctggaagtgaatcgaaatttgaaaaagaagaggaattaccagaaatccctattgtt
ataaaagaagaatacagaacccataaaatatctcaattatcagaagaatctatcacagaa
aaagtaacattatctggttgggtttcaagtgtaagagatcatggagaattgatgtttatc
gatttacgagattcaagcaatcaagtttttcaagttcgtttgagtagagagtctttccct
aatttagatgaattagtgaagttgaaaccagaatcggtaatttctgtaacaggagttgtc
gttcaaagaaatgaagacgattacaatgcaggtttaagaactggtaaattagaattagaa
acttctgatttagagatattaaacctttctaaaacattgccttttgaaataaaaagagca
acaaaatcgaatgaaacagttcgttttcaatataaatttttagaccacagaaatgatgat
gttcgtagagccattgtaaatcgtcataaagtaattaaactattacgtgacattttagat
gaagaggaatttttagaaattgaaactcctattttaactgcaggaacagatgaaggtgca
agagaatttattgtgccaacaagaaaacaatctggttctttttacacgttaccacaagcg
ccacaacaatttaagcaaatgctaatggtgggtggatttgaaaaatattttcaaattgca
cgttgttttagagatgaagattcacgtggagacagacaaccagaatttacacaattagat
atcgaaatggcgtacgcaagtatgcaacaaatcatagatttaaacaccaaaatgtttaat
gaagtggtgcgtaaaatttatggtaaaaaatggattttgcatccttttgaagttattact
tataaagatgccatggataaatatggttgtgacagaccagatttacgttacggattgcaa
atgcaagacattacagatattgtaaaagatactacttttcaggtttttagcaaaccaatt
gaagaaggtggaattgtaaaatgtattaaggtttctgcgaaagaacaaggaaacaaaaga
atgtctaaaggtcagattgaaaacttgacagctattgcacaacaaaatggtttaggtggt
ttggcttacattattgtaaatgaaaacgatttacaatcgccaattattaaatttttaggt
gaagaaattgccgcaaacattatcaaaacaaccaatgctcaaattggtgatattgtattt
ttctctgctgcagattatgcaactgccaacaaagctttggatgctgttcgtcaagaaatg
ggacgaattttaaagttgataaatccgaaagaattaaaaccagcttgggtggtagatttc
ccaatgtttgaaaaaacagacgaaggaagatggacgtttacgcacaatcctttttcgatg
ccagcagtatatgatttagaaaaacacatgactggaaatgatgatgaaatcggaacaata
atcgcacaacaatacgatttaatcttaaatggttacgaaattggtggaggttccgttcgt
gcgcacaaagcagaaattttagaagcaacctataaaaatatgggttatgataaagaagga
atgctaaaaagtgtaggaacaatgtacaaagcattccaatatggagcgccaccacatgga
ggaattgcttggggaattgacagattaatgatgattttagaaaagaaagcttctattaga
gaagttatggcgtttccaaaaacaggttcatccgaagatttattatttaatgcaccttct
attttatcagataaaaaagtggaggaaatgaatgtgaggattattaaaaaataa
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