Polaribacter pectinis: H9W90_09355
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Entry
H9W90_09355 CDS
T08187
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03030
DNA replication
ppec03430
Mismatch repair
ppec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9W90_09355
03430 Mismatch repair
H9W90_09355
03440 Homologous recombination
H9W90_09355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppec03032
]
H9W90_09355
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_09355
Enzymes [BR:
ppec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9W90_09355
DNA replication proteins [BR:
ppec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9W90_09355
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9W90_09355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
LEM-3_GIY-YIG
RNase_H_2
GIY_YIG_2
Rv2179c-like
DUF7508
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QNM84409
UniProt:
A0A7G9L710
LinkDB
All DBs
Position
2074243..2075601
Genome browser
AA seq
452 aa
AA seq
DB search
MLYTVIDIETTGNGYKGSKITEISIFVFDGKKVVDEYTTLINPEQNIPPFITNLTGITNA
MVRNAPKFYEVARKIEEITKDTIFVAHNVNFDYNIIQAEFKSLGFDFKRKKLCTVRLSRK
IIPGLNSYSLGNICTSENIPINGRHRAKGDAEATTELFRRLIERDDQFIINSFLHPRSRQ
ATLPPLLDKKVVDNLPETFGVYYFKNLAKEVIYVGKANNIKQRVISHFYDKKKKEQNMCL
ETADISFTETGSELLALLLESEEIKHIYPKYNRAQRRAGEAVGLFSYEDQKGIIHLAYNR
LKLAPNPIMKYYSVAECRNHLEVLCKEFELCPKYCHLQTNVSSCFHYQLKECKGICCDKE
AVDDYNIRVRQAIKSVGIDAENLVIKETGRTKDEVGFALILDGIYKGIGYLDTSQDVLLE
KPADYQFFVEPKKDNRDIQRIISAYLKKINSH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgctatatacagtaatagacatagagactacaggaaatggatataaaggttctaaaata
accgaaatatccatttttgtttttgatggaaagaaagttgtagacgaatacacaacactt
ataaatccagaacaaaatatcccgccatttattaccaatcttacaggcattacaaatgca
atggtaaggaatgcacctaaattttatgaagttgctagaaagattgaagaaattacaaaa
gacaccatttttgtagcacataatgtaaacttcgattataacataattcaagctgaattt
aaaagtttaggattcgattttaaacgaaaaaaactatgtacagttcgtttgtcgagaaaa
attattcctggtttaaattcttacagtttaggtaatatttgtacttcagaaaatattcca
attaacggcagacacagagccaaaggcgatgcagaagccacaacagaattatttagaagg
ttaattgaaagagatgatcaatttattattaattcatttctgcacccacgttctagacaa
gcaaccttaccacctcttttagataaaaaagttgttgataatttacccgaaacttttggc
gtttattactttaaaaatttagcaaaagaagttatttatgttggtaaagctaacaacata
aagcaacgtgtaatcagtcatttttacgataaaaagaaaaaggaacaaaatatgtgttta
gaaaccgcagacatttcttttacagaaactggtagcgaattactagcactacttttagag
tctgaagaaattaaacacatttatccaaaatataatagagcgcaaagaagagcaggagaa
gctgttggtttattttcttatgaagatcaaaaagggattattcatttggcttataaccgc
ttaaaattagctcccaatccaataatgaagtactattctgttgcagaatgtagaaatcat
ttagaggttctttgtaaagaatttgaattatgccctaaatattgtcatttacaaaccaat
gtctctagttgttttcattatcaactgaaagaatgtaaaggtatttgttgcgataaagaa
gctgtggatgattataatattcgtgttagacaagccattaaatctgtaggaattgatgca
gaaaatttagttattaaagaaacaggaagaacaaaagacgaagtaggttttgctttaatt
ttagatggaatctacaaaggaattggttatttagatacttctcaagatgtgctattagaa
aaaccagcagattatcaattctttgttgaaccaaaaaaagataatagagatattcaaaga
attatttcagcatatttaaagaaaattaatagccattaa
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