Polaribacter pectinis: H9W90_14845
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Entry
H9W90_14845 CDS
T08187
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ppec
Polaribacter pectinis
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppec03032
]
H9W90_14845
03036 Chromosome and associated proteins [BR:
ppec03036
]
H9W90_14845
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_14845
DNA replication proteins [BR:
ppec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H9W90_14845
Chromosome and associated proteins [BR:
ppec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H9W90_14845
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H9W90_14845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QNM85445
UniProt:
A0A7G9L9Z6
LinkDB
All DBs
Position
3359270..3359560
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AA seq
96 aa
AA seq
DB search
MTKADIVSKISDKSGIEKTDVLATVEAFMTEVKGALESGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKTFTEGVKSKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcgtatcaaaaatttcagacaaatcaggaattgaaaaaacggat
gttttggcaactgttgaagcattcatgactgaagtaaagggtgcattagaaagtggtgac
aacgtttatttaagaggttttggtagttttattatcaaaactagagcagaaaaaacaggt
agaaatatttcaaaaaatactactattaaaattcctgctcacaacattccagcttttaaa
ccagcaaaaacttttactgaaggagtaaaaagtaaagtagctgttaagtaa
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