Polaribacter pectinis: H9W90_15120
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Entry
H9W90_15120 CDS
T08187
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppec
Polaribacter pectinis
Pathway
ppec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9W90_15120 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_15120 (ruvB)
Enzymes [BR:
ppec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9W90_15120 (ruvB)
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9W90_15120 (ruvB)
RecFOR pathway proteins
H9W90_15120 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
nSTAND3
AAA_14
TIP49
ResIII
AAA_16
NB-ARC
AAA_PrkA
RNA_helicase
AAA_33
TsaE
AAA_18
NTPase_1
AAA_28
Bac_DnaA
NPHP3_N
AAA_24
DUF815
Rad17
NACHT
AAA_11
ABC_tran
AAA_17
IstB_IS21
Torsin
Motif
Other DBs
NCBI-ProteinID:
QNM85498
UniProt:
A0A7G9LA49
LinkDB
All DBs
Position
3416654..3417676
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPENTNLSNEDLDVEKKLRPLSFDDFTGQDQAIDNLKVFVEAANQRDEALDHTLF
HGPPGLGKTTLAHILANELQVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLIGATTRSGLLTAPMRARFGISSR
LHYYKTDLLTTIIQRSAHILGVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGDG
NITIEIAQYALKALNVDAHGLDEMDNKILKTIIDKFKGGPVGLSTIATAVSENTETIEEV
YEPFLIQQGFIMRTPRGREVTELAYTHLGRTKGRNQGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacttaaatcctgaaaacaccaatttatcaaatgaagatttagacgttgaa
aaaaaattgcgtccactttccttcgatgattttacaggtcaagatcaagcaattgataat
ctaaaagtttttgtagaagctgcaaatcaaagagatgaagctttagatcatacattgttt
cacgggcctccaggtttagggaaaacaacacttgcgcatattttagcaaacgaattacaa
gttggtataaaagtaacatcaggacccgttttagataagcctggagatttagcaggtttg
cttactaacctagatgaaagagatgtgctttttattgatgaaattcacagattaagtcca
attgttgaagagtatttgtattctgctatggaagattacaaaattgatattatgattgaa
tctggtccaaatgctagaacagttcaaatcaatttagaaccatttactttaattggtgca
acaactcgttcaggattgttaactgcgccaatgagagcaagatttggaattagtagtaga
ttacattattacaaaaccgatttattaacaacaattattcaaagaagtgcacatatttta
ggagtaccaatttctatggaagcagccattgaaattgctggtagaagtagaggaacacca
agaattgcaaatgcattattacgtagagttagagattttgcacagattaaaggagatgga
aatattaccatagaaattgctcaatacgctttaaaggcattgaatgtggatgctcacggt
ttagatgaaatggataataagattcttaaaaccattatcgataaatttaaaggtggccca
gttggtttaagtacaattgcgactgctgttagtgaaaatacagaaaccattgaagaagtt
tatgaaccctttttaattcaacaaggttttataatgagaactccaagaggaagagaagtt
acagaattagcatacacccatctaggtagaacaaaaggaagaaatcaaggagagttattt
taa
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