KEGG   Phyllobacterium pellucidum: LLE51_010730
Entry
LLE51_010730      CDS       T11259                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pped  Phyllobacterium pellucidum
Pathway
pped02024  Quorum sensing
pped03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pped00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LLE51_010730 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LLE51_010730 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pped03019]
    LLE51_010730 (hfq)
   03036 Chromosome and associated proteins [BR:pped03036]
    LLE51_010730 (hfq)
Messenger RNA biogenesis [BR:pped03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LLE51_010730 (hfq)
Chromosome and associated proteins [BR:pped03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LLE51_010730 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: UGY08525
LinkDB
Position
2231964..2232203
AA seq 79 aa
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEVEESD
NT seq 240 nt   +upstreamnt  +downstreamnt
atggctgaacgatcgcagaatcttcaggatctttttctgaattcagtcagaaaacaaaag
atttctctgacaattttcctcatcaatggtgtgaaactgaccggcattgtcacttctttt
gacaacttttgcgtgcttttacgccgtgacggccattcgcagctcgtctacaaacatgcg
atctcgaccataatgccgagccagcccgtgcaaatgttcgaagttgaagagagcgactga

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