Phyllobacterium pellucidum: LLE51_012610
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Entry
LLE51_012610 CDS
T11259
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pped Phyllobacterium pellucidum
Pathway
pped03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pped00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLE51_012610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pped03019
]
LLE51_012610
Enzymes [BR:
pped01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLE51_012610
Messenger RNA biogenesis [BR:
pped03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLE51_012610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UGY11310
LinkDB
All DBs
Position
complement(2600446..2601780)
Genome browser
AA seq
444 aa
AA seq
DB search
MGLNVVLLKAIEAAGMAEPKPIQEQAIPAQVSGKDILGIAQTGSGKTAAFSLPILQKIMG
LGDKRKGKTARALILAPTRELAVQIEETIRKLSKGAHISTALVLGGVSRISQIKKMQPGV
DVLIATPGRLTDLVRENCIDLSETRWLVLDEADRMLDMGFINDVKRIAKGTHRDRQTALF
SATMPQEVATLAQGLLRDPVRVEVAPQGTTAAEIKQVVHAIPTKQKKQVLSAMLKDEALA
SVIVFTRTKHGADAVTRVLEKDGYEVAAIHGNKSQNARQRALNGFKDGSVRILVATDIAA
RGIDVVGISHVINFDLPDEPESYVHRIGRTGRNGASGSAITLYDPAEESVKLKAVERVTR
MRLPMADSPVDLSSLPARAANSDQRPPRREGGSGAPGKKPHRGQAASKPREARGEKIWSN
DGGAPAQKRPFRRNKRRSFGAKAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaacgtggtccttctcaaggccatcgaagcggccggcatggcagagccgaaa
ccaatccaggaacaggctattccggcacaggtgtccggcaaggacattctcggcatcgcc
cagacgggttcgggcaagacggctgccttcagcctgccgatcctgcagaagatcatgggt
cttggcgacaagcgcaagggcaagactgcccgcgccctcattctcgccccgacccgcgag
cttgccgtgcagatcgaagaaacgatccgcaagctctcgaagggcgcgcatatttcgaca
gcgcttgttctcggcggcgtctcgcgcatatcccagatcaagaagatgcagccgggcgtt
gacgtcctcatagcaacgccgggccgcctgaccgatctcgtgcgcgaaaactgcatcgat
ctttcggagacgcgttggcttgtcctcgatgaagccgaccgcatgctcgacatgggtttc
atcaacgatgttaagcgcatcgccaagggcacgcatcgcgaccgccagaccgcacttttc
tcggcaacgatgccccaggaagtcgccacgctggcccagggcttgctgcgcgacccggtt
cgcgtcgaagttgcgccgcaaggcacgaccgcggccgagatcaagcaggtggtccacgcc
attccgacgaagcagaaaaagcaggttctttcggcaatgctgaaggacgaggcgctggct
tcggtcatcgtcttcacccgtaccaagcacggcgcggatgcggtaacgcgcgtcctcgag
aaggacggctatgaagttgccgccattcacggcaacaagtcgcagaatgcccgccagcgg
gcgttgaacggcttcaaggacggttccgttcgcattctcgttgcgacggatatcgcggcg
cgcggcattgacgtcgtcggcatcagccatgtcatcaatttcgacctgccggatgagccc
gagagctacgttcaccgcattggccgtaccgggcgtaatggcgcatcgggttcggcgatt
acgctttatgatccggccgaagagagcgtcaagctgaaggccgtcgagcgcgttacgcgc
atgcgtctgccgatggccgattcgccggttgatctttcgagcctgccggcccgtgctgct
aatagcgaccagcgtccgccgcgccgcgaaggcggcagcggtgctccgggcaagaagccg
catcgcggtcaggcagctagcaagccgcgcgaggcgcgtggtgagaagatctggagcaat
gatggtggcgccccggcgcaaaagcgtccgttccgccgcaacaagcgccgcagctttggc
gccaaggctgcctga
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