Proteus penneri: I6G31_04570
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Entry
I6G31_04570 CDS
T07624
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppee
Proteus penneri
Pathway
ppee03030
DNA replication
ppee03430
Mismatch repair
ppee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G31_04570 (holA)
03430 Mismatch repair
I6G31_04570 (holA)
03440 Homologous recombination
I6G31_04570 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppee03032
]
I6G31_04570 (holA)
03400 DNA repair and recombination proteins [BR:
ppee03400
]
I6G31_04570 (holA)
Enzymes [BR:
ppee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G31_04570 (holA)
DNA replication proteins [BR:
ppee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G31_04570 (holA)
DNA repair and recombination proteins [BR:
ppee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G31_04570 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DUF4856
Motif
Other DBs
NCBI-ProteinID:
QPT34685
LinkDB
All DBs
Position
985911..986945
Genome browser
AA seq
344 aa
AA seq
DB search
MIRLYPEQLNAQLQEGLRQSYLLWGNEPLLLQESQDAIQSVAKAQGFIEHYQFTLDNNTD
WNEIYSLCQSLSLFSQRQSLLLHLPENGPNAAMSEKLTRLSQELHQDLLLILRGNKLTKA
QENSEWFKTLSQNGTYISCLTPELDKLPNWVARRAKQKGLALDEQGNQLLCYCYEGNLLA
LAQAIERLSLLYPDGKLTLPRVEAAVNDASHFTPYHWVDALLTGKTQRAWHILQQLKRED
SEPVILLRTLQRELMQLITLHRESKTASLKTIFDKHRIWQNRRPIFTAALQRLSEHQLLT
AIRLLASIEMTIKQDYGQTVWPSLSALGLLLCGKALPEGFVNHA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttatatccagaacaactgaatgcgcagctccaagaggggctgcgccaaagt
tatctactctggggtaatgaacctctgttactccaagagtctcaagatgccatccaatct
gttgctaaagcccaaggatttattgaacactatcaatttactcttgataataatacggac
tggaatgaaatttactcactttgtcaatcgctaagccttttttctcaaaggcaatctctt
ttgctgcatttacctgaaaatggccccaatgcagccatgtcagagaaactcacaaggtta
tctcaagagttacatcaagatttattgttgattttacgtggcaataaactcactaaggct
caagaaaacagtgaatggtttaaaacattaagccagaatggaacgtatatttcttgtctg
acacctgaacttgataaattacctaattgggttgctcgtcgagcaaaacaaaaaggatta
gcgctggatgaacaaggtaaccaactactttgctactgctatgaaggtaatttgctcgca
ttagcacaagcgatagagcgtctttccctactttatcctgacggtaaattgacattacct
agagtagaagcggccgttaatgacgcgtcacattttaccccttatcactgggttgatgca
ttactgacaggaaaaacacaacgtgcatggcatatcttgcaacaactcaaaagagaagat
tctgaacctgttattttacttagaactttacaacgtgagttaatgcagttgattacacta
catcgtgaatctaaaacagcttcgttaaaaacgatttttgataagcatcgaatttggcaa
aacaggcgcccaatattcacagcagcactacagcgtttatccgagcatcaattgctaacg
gcaatacggttattagccagtatcgaaatgaccatcaaacaagattatggtcaaactgtt
tggccatctcttagcgcgttaggcttattgctttgtgggaaagcattaccagaaggattt
gtaaatcatgcctaa
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