Proteus penneri: I6G31_07850
Help
Entry
I6G31_07850 CDS
T07624
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppee
Proteus penneri
Pathway
ppee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G31_07850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppee03019
]
I6G31_07850
03009 Ribosome biogenesis [BR:
ppee03009
]
I6G31_07850
Enzymes [BR:
ppee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G31_07850
Messenger RNA biogenesis [BR:
ppee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G31_07850
Ribosome biogenesis [BR:
ppee03009
]
Prokaryotic type
rRNA helicases
I6G31_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
DRTGG
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QPT35266
LinkDB
All DBs
Position
complement(1737551..1739407)
Genome browser
AA seq
618 aa
AA seq
DB search
MTTETDMTFADLGLSAPILTALNDLGYEKPSPIQQQCIPFLLNGNDVLGMAQTGSGKTAA
FSLPLLHNLDESLKAPQILVLAPTRELAVQVAEAIEDFSKHLPKVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLNRGTLDLSKLKGLVLDEADEMLRMGFIEDVENILSKIPA
EHQTALFSATMPEAIRRITRRFMNDPKEVRIQSSVTTRPDISQSYWMTFGARKNEALIRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQSLREQTLERLKNGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKMTIPEVELPNAELISQRRQEKFAQQIAQQLETSNLDQYRALLPKLAPQGEEALD
METLAAVLLKMAQGERALILPPDPVRRPRREFNDRDDRRRDNDRERSPRRERRDAGEMDL
YRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLYGSHSTIELPKGMPTDLLSHFTRT
RIMNKPLNMQLVGDAQSQPFRERRNNSRRDGQPQGGRRFSNGDQPQRRGNNDRGGERGNF
RSRNNEGTPRRRSSSHNQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaaaccgatatgacttttgctgatctaggtttatcagcacctattttgact
gcactgaatgacttaggctacgagaagccttctccaattcagcaacaatgtattcctttc
cttttaaacggtaatgatgttttaggtatggcacagaccggtagtggtaaaactgccgca
tttagcctgccattattacataatcttgatgaatcattaaaagcaccacaaattttagtt
ttagcgcctactcgtgaacttgcggttcaggttgctgaagcaattgaagatttttctaag
catttaccaaaagtaaatgttgttgctttatatggtggtcagcgttacgacgttcaatta
cgtgcgttacgtcaaggaccacaagtggttgtaggtacaccaggtcgtttattagaccat
ttaaaccgtggcacattagatttatctaaactgaaaggtttagttttagatgaagctgat
gaaatgttgcgtatgggctttattgaagatgttgaaaatatcttaagtaagatcccagca
gaacaccaaactgcgctgttctctgcaaccatgccagaagctattcgtcgtattacacgt
cgcttcatgaatgatcctaaagaagttcgcattcaaagcagtgtaacaactcgtccagat
atcagccaaagttactggatgacatttggtgcgcgtaaaaatgaagcattaattcgtttc
ttagaagcggaagactttgatgcagcaattattttcgttcgtactaaaaacgcaacatta
gaagttgctgaagcattagaacgtaatggctataacagtgccgcattaaatggtgacatg
aaccaatcattgcgtgagcaaacgttagagcgtttgaaaaatggtcgtttagacatttta
atcgcgactgatgttgcagctcgtggtcttgatgttgaccgtatcagccttgttgtgaac
tatgatatcccaatggattcagaatcttatgttcaccgtattggtcgtactggtcgtgcc
ggccgtgctggtcgcgcaattttatttgttgataaccgtgagcgtcgtttactgcgcaat
atcgaacgtacaatgaagatgacaattcctgaagtagaactgccaaatgcagaactcatc
agccaacgtcgtcaggaaaaatttgcacagcaaatcgcgcaacaattagaaactagcaac
cttgaccagtaccgtgctctgttacctaaattagctccacaaggtgaagaagcgctggat
atggaaacactggctgcggtattactgaaaatggctcaaggtgagcgcgcacttattctg
ccacctgatcccgttcgtcgtcctcgtcgtgaatttaacgatcgtgacgatcgtcgccgt
gataacgaccgcgagcgttctcctcgtcgtgaacgtcgtgatgctggcgaaatggattta
tatcgtatcgaagtgggtcgtgatgatggtgttgaagttcgtcatatcgttggtgcgatt
gctaacgaaggtgatatcagcagccgttacattggtaatatcaaactgtatggttctcac
tcaaccattgaattaccaaaaggtatgccaactgatttattaagccatttcacacgcacg
cgtattatgaacaaaccactgaatatgcaattagtgggtgatgctcaatctcagcctttc
cgtgagcgtcgtaataacagccgtcgtgatggtcagccacaaggtggtcgtcgttttagt
aacggtgaccaaccacaacgtcgtggtaataacgatcgtggtggcgaacgcggtaacttc
cgtagtcgtaataacgaaggtactccacgtcgtcgtagcagctctcataaccaataa
DBGET
integrated database retrieval system
