Proteus penneri: I6G31_11165
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Entry
I6G31_11165 CDS
T07624
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ppee
Proteus penneri
Pathway
ppee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G31_11165 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppee03021
]
I6G31_11165 (rpoB)
03400 DNA repair and recombination proteins [BR:
ppee03400
]
I6G31_11165 (rpoB)
Enzymes [BR:
ppee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6G31_11165 (rpoB)
Transcription machinery [BR:
ppee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G31_11165 (rpoB)
DNA repair and recombination proteins [BR:
ppee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G31_11165 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
SPG4
Motif
Other DBs
NCBI-ProteinID:
QPT32688
LinkDB
All DBs
Position
2420084..2424112
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMNYSTEEILGLFFEKTLFEISNNKLMMT
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKEQIDRIEVPVEYIAGKVVARD
YIDEATGELICAANMEISLDVLARLSQAGHKTIETLFTNDLDHGAYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLGRDEVEGSGIL
SQEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRVVENNAVT
DEIHYLSAIEEGNFIIAQANSVLDDDNHFVEELVTCRHKGESSLFSRDQVQYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRGDKPLVGTGMERAVAVDSGVTAVAKR
GGVVQYVDASRIVIKVNEEETYAGEAGIDIYSLTKYTRSNQNTCINQTPCVSLGEPVDRG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNYEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEESQLREVKKDL
TEELRIFEAGLFARIRGVLIAGGIEAEKLDKLPRERWLELGIADEEKQNQLEQLAEQYDE
LKAEFAKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGNPVDLVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQKAYDLGMAPRQKVDLDTFSDEEVLRLAENLKKGMPTATPVFDGAEEMEIKEMLK
LADLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgttccctatctcctttctatccaacttgactcgttccagaagttcatcgag
caagatcctgaaggtcaaaacggtctggaagcagctttccgttccgtattccctatccaa
agctatagtggcaatgctgaattacagtatgtcagctaccgcttaggcgagcctgttttt
gatgttaaagaatgtcagatccgcggtgtaacttattctgcacctttgcgtgtaaaactg
cgtctggtcatttatgaacgtgaagccccagaaggcaccgttaaagacatcaaagaacaa
gaagtctatatgggtgaaatcccattaatgaccgataacggtacctttgtaatcaatggt
actgaacgtgttatcgtttcccagttacaccgtagccctggtgtgttctttgatagtgac
aaaggtaaaacacactcatctggtaaggtactgtataacgcacgtattatcccttatcgt
ggctcatggttagacttcgaattcgaccctaaagataacctttttgtccgtattgaccgt
cgccgtaaattacctgcgactatcattttacgcgcgatgaactacagcaccgaagaaatc
ttaggtttattcttcgaaaaaacattgtttgaaatcagcaacaacaagctgatgatgaca
ttagtgcctgaacgtctgcgtggtgaaactgcttcatttgatattgaagcaaacggcaaa
gtgtatgtcgaaaaaggccgtcgtattaccgctcgccatattcgtcaattagaaaaagag
caaattgaccgcattgaagtacctgttgaatacattgcaggtaaagtggttgctcgtgac
tatattgatgaagcaacaggtgaactgatttgtgctgctaacatggaaatctctttagat
gtgttagctcgcttaagtcaagctggtcataaaacgattgaaacgctgtttactaatgac
ttagatcatggtgcttatatttcagaaactgttcgcgtcgatcctacaaatgatcgttta
agcgcattagttgaaatctatcgcatgatgcgtcctggtgaaccacctacacgcgaagct
gcagaaaacttatttgagaacttattcttctctgaagatcgttatgatctgtctgctgtg
ggccgtatgaaattcaaccgttctttaggccgcgacgaagttgaaggttctggcatctta
agccaagaagatatcattgaagtaatgaaaaaactgattgatatccgtaatggtaaaggt
gaagtggatgatatcgaccacttaggtaaccgtcgtattcgttctgttggcgaaatggct
gaaaaccaattccgtgttggtctggtgcgtgttgagcgtgcagttaaagaacgtctgtct
ttaggcgatcttgatgcattaatgccacaagatatgatcaacgcaaaaccgatttctgct
gctgtcaaagagttctttggctctagccagttatcacagtttatggatcagaataacccg
ctatcagaaattacgcacaaacgtcgtatttctgcattaggcccaggtggtttgacccgt
gaacgtgcaggctttgaagttcgagacgtacacccaactcactacggtcgtgtgtgccca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactcattatctgtttatgcacag
actaacgagtacggtttccttgaaacgccttaccgtgttgttgaaaataacgctgtaaca
gatgaaattcactatctgtctgcaatcgaagaaggtaacttcatcattgctcaggctaac
tccgtattagacgatgacaatcacttcgttgaagaattagtgacttgccgtcataaaggt
gagtcaagcttatttagtcgtgaccaagttcagtacatggacgtttcaacccaacaggtt
gtttctgtcggtgcttcactgatcccattccttgaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggctgttcctacacttcgtggtgataaaccactagta
ggtacaggtatggagcgtgctgtagcggttgactccggtgttactgcggttgctaaacgt
ggtggtgttgttcagtatgttgatgcttctcgtatcgttatcaaagttaacgaagaagag
acttacgctggtgaagcgggcattgatatctatagcttgactaaatacacccgttctaac
cagaacacatgtattaaccaaactccttgcgtatctttaggtgaacctgttgatcgcggt
gatgtgttagctgatggtccttcaacagaccttggtgagttagcattaggtcaaaacatg
cgcgtggcatttatgccatggaatggttataactacgaggactccatccttgtatctgag
cgtgttgttcaagaagatcgtttcacaactatccacattcaagaactggcttgtgtctct
cgtgatactaagttagggcctgaagagatcactgctgatatcccgaacgtcggtgaagct
gcgttatctaaactggatgaatcaggtatcgtttatatcggtgctgaagtgaaaggcggt
gacattctggttggtaaagtaacacctaaaggtgaaactcaactgactccagaagagaaa
ctactgcgtgctatcttcggtgaaaaagcgtctgatgttaaagattcttctctgcgtgtt
cctaatggtgtgtctggtacagttatcgacgtacaagtcttcacccgtgatggcgtagaa
aaagataaacgtgcattagaaatcgaagagtcacagttacgtgaagttaagaaagactta
actgaagaactgcgtatctttgaagctggtctattcgctcgtatccgtggtgttctgatt
gctggcggtattgaagctgagaaattagataaattacctcgcgaacgttggttagaactg
ggtattgcggatgaagagaagcaaaaccagttagaacaattagctgaacagtatgatgaa
ctgaaagctgagttcgcgaagaaactggaagctaaacgtcgtaaaatcactcaaggtgat
gatttggcaccaggcgtgctgaaaatcgttaaggtttacctggcggttaaacgtcagatc
caacctggtgataagatggcgggtcgtcatggtaacaagggtgttatctctaagattaac
ccaattgaagacatgccatacgatgaaaacggcaacccagttgacctcgtactgaaccca
ctgggtgttccatcacgtatgaacatcggtcagatccttgaaactcacttgggtatggct
gctaaaggtatcggtgataagatcaatgcgatgctgaaacagcaacaagaagttgctaaa
ttacgtgaatttatccagaaagcttacgatctgggtatggcacctcgtcagaaagttgat
ctggacaccttcagcgatgaagaagtgttacgtctggctgaaaacctgaaaaaaggtatg
ccaaccgcaacaccagtgttcgatggtgcagaagaaatggaaattaaagagatgctgaaa
ttagctgatcttccaacttctggtcagattacacttttcgatggtcgtacaggtgaacaa
tttgagcgtccagtaactgttggttacatgtacatgctgaaactgaaccacttagttgat
gataagatgcacgcccgttcaaccggttcgtacagcttagttactcagcaacctcttggt
ggtaaagctcagtttggtggacagcgtttcggggagatggaagtgtgggcactggaagca
tacggtgcagcttatactcttcaagaaatgcttactgttaagtcggatgacgttaacggt
cgtaccaaaatgtacaaaaacatcgttgatggtaaccatcagatggaaccaggtatgcca
gagtcgttcaacgtattgttgaaagagatccgttcactgggtatcaacatcgaattggaa
gacgaataa
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