Pseudomonas pergaminensis: KUA23_00620
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Entry
KUA23_00620 CDS
T08563
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KUA23_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppeg03021
]
KUA23_00620
Transcription machinery [BR:
ppeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KUA23_00620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
GerE
HTH_29
UVB_sens_prot
Motif
Other DBs
NCBI-ProteinID:
USW01304
LinkDB
All DBs
Position
complement(129558..130073)
Genome browser
AA seq
171 aa
AA seq
DB search
MPSAEYFPCENAVQALYCTHHSWLNTWLRSRLGNAADAADLAQDTFVRLLQKTERFELKA
PRAFLRTIARGLVIDHWRREEIERAYLESIAHLPEAMAPSAEARALVLELLEDISRLLEG
LKPKVRKAFLLAQCDGLTHKQIAMHMGVSLRSVERYVAEALYHCYVLRYET
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgctgagtacttcccgtgtgaaaacgctgttcaggcgctgtattgcacccat
cacagttggctgaacacctggctgcgtagccgtctgggcaacgcggcggatgctgccgac
ttagcacaagacacctttgtacgcctgctgcagaaaaccgaacgctttgaactcaaggct
ccccgggcatttttgcgcaccattgcacgagggttggtgattgatcactggcgccgcgaa
gagatcgaacgggcttacctcgaatctatcgcccatttgcccgaggcaatggcgccgagc
gcggaagcgcgggcgctggtgttggaattactggaagatatttcccgtcttttggagggt
ctcaagcctaaggtgcgtaaggcatttctgctggctcagtgcgatgggctgacacacaag
caaatcgcgatgcacatgggcgtgtcgctgcgctcagtggagcgttatgtggccgaggcg
ctctaccattgctatgtcctgcgatatgaaacatga
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