Pseudomonas pergaminensis: KUA23_00935
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Entry
KUA23_00935 CDS
T08563
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg00250
Alanine, aspartate and glutamate metabolism
ppeg00310
Lysine degradation
ppeg00350
Tyrosine metabolism
ppeg00650
Butanoate metabolism
ppeg00760
Nicotinate and nicotinamide metabolism
ppeg01100
Metabolic pathways
ppeg01120
Microbial metabolism in diverse environments
Module
ppeg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KUA23_00935 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KUA23_00935 (gabD)
00310 Lysine degradation
KUA23_00935 (gabD)
00350 Tyrosine metabolism
KUA23_00935 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KUA23_00935 (gabD)
Enzymes [BR:
ppeg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KUA23_00935 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KUA23_00935 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KUA23_00935 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
USW01361
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All DBs
Position
202764..204206
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERANKLRRWFELLIENQEDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPKGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKVAVAKLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADALSKGAKLLAGGKV
MEGNFFEPTILVDVPKDAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagatacccagttgttccgccagcaagcctttatcgatggcgcttgggtc
gatgcggacaacggtcagaccatcaaggtcaacaacccggccacgggtgagattctcggc
accgtgccgaagatgggcgccgctgaaacacgccgcgccatcgaagcggccgacaaagcg
ctgccggcctggcgtgccctgactgccaaagagcgcgccaacaagctgcgccgctggttc
gaactgctgatcgagaaccaggaagacctcggtcgcctgatgacgctcgagcaaggcaag
ccgctggctgaagccaagggcgagatcgtctacgccgcgtcctttatcgaatggttcgca
gaagaagccaagcgcatctacggcgacgtgatcccgggccaccagcccgacaagcgcctg
atcgtgatcaagcagccgatcggcgtgaccgctgcgattaccccgtggaacttcccggcc
gcgatgatcacccgtaaagccggtccggccctggccgccggttgcaccatggtgatcaag
ccagcttcgcaaacgccgttctcggccctggccttggttgagctggcgcaccgtgccggt
atccccaaaggtgtgttgagcgtggtgaccggcagcgccggcgacatcggcggcgagctg
accagcaacccgatcgtgcgcaaattgtccttcaccggctcgaccgaaatcggtcgccag
ttgatggccgaatgcgccaaggacatcaagaaagtctccctggaattgggcggcaacgcg
ccgttcattgtgttcgacgacgccgacctggataaggccgtcgaaggcgcgatcatctcc
aagtaccgcaacaacggccagacttgcgtctgtgccaaccgcttgtacatccaggattcg
gtgtacgacgcattcgcggaaaaactcaaagtggccgtggccaagctcaagatcggcaac
ggtctggaagagggcaccaccaccggtccgctgatcgacgaaaaagccgtcgccaaggtc
caggagcacattgccgatgcgctgagcaaaggcgccaagctgttggccggtggcaaggtg
atggaaggcaacttcttcgagccgactattctggtcgacgtgccgaaagacgctgcggtg
gcgaaagaagaaaccttcggcccattggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcttggcctcctatttctatgcccgtgac
ctgggccgtgtgttccgcgtggctgaagccctggaatacggcatggtcggcgtcaacacc
gggttgatctccaatgaagtggcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacgggatcgaggattacttggaaatcaaatacctctgcctgggcatc
taa
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