Pseudomonas pergaminensis: KUA23_01460
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Entry
KUA23_01460 CDS
T08563
Name
(GenBank) PelD GGDEF domain-containing protein
KO
K21009
polysaccharide biosynthesis protein PelD
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KUA23_01460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PelD_GGDEF
GAF
GAF_2
GAF_3
Motif
Other DBs
NCBI-ProteinID:
USW03887
LinkDB
All DBs
Position
321146..322513
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AA seq
455 aa
AA seq
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MNSPHMDYSLAPRASGPVSWLETLLVTGLAIGLGFWLTPEDPLQMHGGFPWPILAPLLLG
VRYGFVRGLFSAGLLVAALFALRYSGHEGYTQLEPSFIVGVLVCGMLVGEVRDLWVRRLE
RLQMANEYRQYRLDEFTRAHQILRVSHDLLEQRVAGSDQSLRSSLLGLREKLRGMPVEGD
ALSELAEPIVAMLGQYGALRVAGLYRVDDSEKNVLPQALAMIGVMGPLGTDDGLIKLCLE
RGELVSVRQELIDSGNSAQFSSLQACIPLIDAEGRLLAILAVRQMPFFAFQDRTLSLLSL
LAGHIADLLRRDPHVLQLPDADSQQFTLQLKRSLVDVEQHTLPAGLFAFEMTRANEELSR
LMERSQRGLDLHLAVRNNREHRLLLVLLPLTSPEGTEGYLARIGMLLHEHFGIDTDLDSL
GVRVMPFNLVPGCDRNGLRNFLYNECGLNDQQVAV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccacacatggattacagcctggcgcctcgcgccagcgggccggtgtcttgg
ctggaaacactgctggtgacgggcttggcgattggccttggtttctggctgactcccgag
gacccgttgcagatgcacggtggtttcccttggccgattctggcgccgctgctgttgggt
gtgcgttacggttttgtgcgcggcctgttcagcgcggggctgctcgttgcggcgctgttt
gcgctgcgttacagcggtcatgaaggttatacccagcttgagccgtcgttcatcgtcggt
gtgttggtctgcggcatgctggtgggtgaggtgcgcgacctgtgggtgcgccgcctggag
cgtctgcagatggctaacgaataccgtcagtaccgtctcgacgaatttacccgtgcccac
cagatcctgcgggtttcccacgacctgcttgagcaacgtgtagccggcagtgaccagagc
ctgcgcagttcgctgctgggcctgcgcgaaaaactgcgtggcatgccagttgaaggcgat
gcattgagcgaactggcagagccgattgtggcgatgctcggacagtacggtgcattgcgt
gtggcggggctgtaccgcgtcgacgacagcgagaaaaacgtattgccgcaagccctggcg
atgatcggtgtgatgggccccctgggtaccgacgacggtttgatcaagctgtgcctggag
cgcggtgaactggtcagcgtacgccaggaactgatcgactcgggtaactccgcgcagttc
tcatcgctgcaggcgtgcatcccgttgatcgacgccgaaggtcggctgctggcgatcctg
gcggttcggcagatgccgttcttcgcgttccaggatcgtacgctgagcctcttgtcgctg
ctggctggccacatcgccgacctgttgcgccgcgacccgcacgttctgcaattgcccgac
gccgattcccagcagttcaccttgcagctcaagcgttcgctggtggatgtcgagcagcac
accttgccggccggtctgttcgcattcgagatgacgcgcgccaacgaggaactgtcgcgt
ctgatggagcgcagccaacgtggcctggacctgcacctggcggtgcgcaacaaccgcgaa
catcgtctgctgctggtgctcttgccgctgacaagcccggaaggtaccgaaggctacctg
gcgcggattggcatgctgttgcacgagcactttggtatcgataccgacttggacagcttg
ggtgtgcgggtcatgcctttcaacctggtgcctggctgtgatcgcaacgggctgcgtaac
ttcctctacaacgagtgtggcctgaatgatcagcaagtggctgtttag
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